RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 COQ5Q5HYK3 327 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 OVOS1Q6IE37 1185 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 MRNIPQ6NTE8 343 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 DUS1LQ6P1R4 473 aaKnown RBP15.58■□□□□ 0.09
NUP88-207ENST00000573584 LYSMD3Q7Z3D4 306 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 DHRSXQ8N5I4 330 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 RHEBL1Q8TAI7 183 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 BLOC1S5Q8TDH9 187 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 BRI3BPQ8WY22 251 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 ITFG2Q969R8 447 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 TMEM125Q96AQ2 219 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 FAM210AQ96ND0 272 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 SERPINB11Q96P15 392 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 ATOH8Q96SQ7 321 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 TRIM54Q9BYV2 358 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 SLC52A3Q9NQ40 469 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 SLC45A1Q9Y2W3 748 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 ARL5AQ9Y689 179 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 COL4A4P53420 1690 aaPredicted RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 TNFRSF10BO14763 440 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 CNTN5O94779 1100 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 CYP11A1P05108 521 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 ATXN1LP0C7T5 689 aaKnown RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 C7P10643 843 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 NCK1P16333 377 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 ECT2LQ008S8 904 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 CLCQ05315 142 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 MAPRE1Q15691 268 aaKnown RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 FSCN1Q16658 493 aaKnown RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 SPATA2LQ8IUW3 424 aaPredicted RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 KCTD14Q9BQ13 255 aaPredicted RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 SEMA4BQ9NPR2 832 aaPredicted RBP15.58■□□□□ 0.08
NUP88-207ENST00000573584 RNF181Q9P0P0 153 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 GPR45Q9Y5Y3 372 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 TANC1Q9C0D5 1861 aa15.58■□□□□ 0.08
NUP88-207ENST00000573584 A0A1W2PP18 115 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SH3PXD2BA1X283 911 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 BAIAP3O94812 1187 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ATE1O95260 518 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 HNRNPCP07910 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
NUP88-207ENST00000573584 CTSHP09668 335 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 EEF1DP29692 281 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 RFC2P35250 354 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 KCNK10P57789 538 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TSPY1Q01534 308 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 LIPEQ05469 1076 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 LCP2Q13094 533 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SEMA3AQ14563 771 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ALFQ53S48 1182 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 FBXO48Q5FWF7 155 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TAF2Q6P1X5 1199 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ARRDC2Q8TBH0 407 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 MAGEE2Q8TD90 523 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 SNRNP27Q8WVK2 155 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TFB2MQ9H5Q4 396 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 C8orf4Q9NR00 106 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SMPD3Q9NY59 655 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.57■□□□□ 0.08
NUP88-207ENST00000573584 ZNHIT2Q9UHR6 403 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TIMM22Q9Y584 194 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 CENPFP49454 3210 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 LOC285095A0A1B0GVY8 99 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 CCDC162PA2VCL2 907 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 FOXD2O60548 495 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 ZNF865P0CJ78 1059 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 RHOQP17081 205 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 HOXB8P17481 243 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 CAPGP40121 348 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 CACNB2Q08289 660 aaPredicted RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 SPATS1Q496A3 300 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 GPR107Q5VW38 600 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 PATL1Q86TB9 770 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 THEM5Q8N1Q8 247 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 PGBD5Q8N414 524 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 THAP11Q96EK4 314 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ZYG11BQ9C0D3 744 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 AP5M1Q9H0R1 490 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 POLR1BQ9H9Y6 1135 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 OAS3Q9Y6K5 1087 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 SUPT3HB4E1H0 165 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TMX2-CTNND1H3BSU7 103 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SNAP91O60641 907 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 VPS4BO75351 444 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SUPT3HO75486 399 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 GJB3O75712 270 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 VARSP26640 1264 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 CASP2P42575 452 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
NUP88-207ENST00000573584 SUOXP51687 545 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 CYBRD1Q53TN4 286 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ELMSAN1Q6PJG2 1045 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 SCN4BQ8IWT1 228 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 TEX37Q96LM6 180 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 ANAPC2Q9UJX6 822 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 CDH7Q9ULB5 785 aa15.57■□□□□ 0.08
NUP88-207ENST00000573584 H3BMQ9 156 aa15.56■□□□□ 0.08
NUP88-207ENST00000573584 MT-ND1P03886 318 aa15.56■□□□□ 0.08
NUP88-207ENST00000573584 CYBBP04839 570 aa15.56■□□□□ 0.08
NUP88-207ENST00000573584 TTKP33981 857 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms