RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 SOX17Q9H6I2 414 aaPredicted RBP16.02■□□□□ 0.15
JRK-203ENST00000571961 SLC45A1Q9Y2W3 748 aa16.02■□□□□ 0.15
JRK-203ENST00000571961 TRPV2Q9Y5S1 764 aa16.02■□□□□ 0.15
JRK-203ENST00000571961 GMEB1Q9Y692 573 aa16.02■□□□□ 0.15
JRK-203ENST00000571961 CCDC162PA2VCL2 907 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 WASH4PA8MWX3 477 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 SUPT3HB4E1H0 165 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 CLOCKO15516 846 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 SUPT3HO75486 399 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 CRCPO75575 148 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
JRK-203ENST00000571961 CASP2P42575 452 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 NFYCQ13952 458 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 GPR180Q86V85 440 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 TRPV3Q8NET8 790 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 ARRDC2Q8TBH0 407 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 TEX37Q96LM6 180 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 FAM210AQ96ND0 272 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 SERPINB11Q96P15 392 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 TUBA8Q9NY65 449 aaPredicted RBP16.01■□□□□ 0.15
JRK-203ENST00000571961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.01■□□□□ 0.155e-6■■■■□ 20.5
JRK-203ENST00000571961 PCDHA9Q9Y5H5 950 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 V9GYQ6 96 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 ACOX3O15254 700 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 BAIAP3O94812 1187 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 MATN4O95460 622 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 CYP11A1P05108 521 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 GSK3BP49841 420 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 NUP107P57740 925 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 CLCQ05315 142 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 GALNT3Q14435 633 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 TAF2Q6P1X5 1199 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 BLOC1S3Q6QNY0 202 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 USP50Q70EL3 339 aaPredicted RBP16.01■□□□□ 0.15
JRK-203ENST00000571961 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 THEM5Q8N1Q8 247 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 ATOH8Q96SQ7 321 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 KATNAL1Q9BW62 490 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 NPLQ9BXD5 320 aaPredicted RBP16.01■□□□□ 0.15
JRK-203ENST00000571961 ZYG11BQ9C0D3 744 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 PIF1Q9H611 641 aa16.01■□□□□ 0.15
JRK-203ENST00000571961 TRIM64CA6NLI5 447 aa16■□□□□ 0.15
JRK-203ENST00000571961 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
JRK-203ENST00000571961 SCIMPQ6UWF3 145 aa16■□□□□ 0.15
JRK-203ENST00000571961 ANKRD23Q86SG2 305 aa16■□□□□ 0.15
JRK-203ENST00000571961 CIR1Q86X95 450 aaPredicted RBP16■□□□□ 0.15
JRK-203ENST00000571961 SNRNP27Q8WVK2 155 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 LZICQ8WZA0 190 aa16■□□□□ 0.15
JRK-203ENST00000571961 TMEM125Q96AQ2 219 aa16■□□□□ 0.15
JRK-203ENST00000571961 SEMA3CQ99985 751 aa16■□□□□ 0.15
JRK-203ENST00000571961 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
JRK-203ENST00000571961 ALG2Q9H553 416 aa16■□□□□ 0.15
JRK-203ENST00000571961 SLC52A3Q9NQ40 469 aa16■□□□□ 0.15
JRK-203ENST00000571961 PTBP2Q9UKA9 531 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 FADS3Q9Y5Q0 445 aa16■□□□□ 0.15
JRK-203ENST00000571961 DOCK3Q8IZD9 2030 aa16■□□□□ 0.15
JRK-203ENST00000571961 UBA6A0AVT1 1052 aaPredicted RBP16■□□□□ 0.15
JRK-203ENST00000571961 RASAL1O95294 804 aa16■□□□□ 0.15
JRK-203ENST00000571961 CHRNA1P02708 482 aa16■□□□□ 0.15
JRK-203ENST00000571961 RHOQP17081 205 aa16■□□□□ 0.15
JRK-203ENST00000571961 PURAQ00577 322 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 FSCN1Q16658 493 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 MS4A13Q5J8X5 152 aa16■□□□□ 0.15
JRK-203ENST00000571961 PAGE3Q5JUK9 113 aa16■□□□□ 0.15
JRK-203ENST00000571961 MRNIPQ6NTE8 343 aa16■□□□□ 0.15
JRK-203ENST00000571961 SPRED1Q7Z699 444 aa16■□□□□ 0.15
JRK-203ENST00000571961 DCP1BQ8IZD4 617 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 MAGEE2Q8TD90 523 aaPredicted RBP16■□□□□ 0.15
JRK-203ENST00000571961 SEPT8Q92599 483 aa16■□□□□ 0.15
JRK-203ENST00000571961 GFM2Q969S9 779 aaKnown RBP16■□□□□ 0.15
JRK-203ENST00000571961 C1orf74Q96LT6 269 aa16■□□□□ 0.15
JRK-203ENST00000571961 TMEM74Q96NL1 305 aa16■□□□□ 0.15
JRK-203ENST00000571961 CXorf21Q9HAI6 301 aa16■□□□□ 0.15
JRK-203ENST00000571961 ABI2Q9NYB9 513 aaPredicted RBP16■□□□□ 0.15
JRK-203ENST00000571961 CPA4Q9UI42 421 aa16■□□□□ 0.15
JRK-203ENST00000571961 USP22Q9UPT9 525 aa16■□□□□ 0.15
JRK-203ENST00000571961 FAM50BQ9Y247 325 aa16■□□□□ 0.15
JRK-203ENST00000571961 GPR45Q9Y5Y3 372 aa16■□□□□ 0.15
JRK-203ENST00000571961 LOC285095A0A1B0GVY8 99 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 NCF1BA6NI72 391 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 NCF1CA8MVU1 366 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 ATE1O95260 518 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 NCF1P14598 390 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 IDO1P14902 403 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 TBX4P57082 545 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 NRG1Q02297 640 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 LIPEQ05469 1076 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 PMS2P3Q13401 168 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 C16orf72Q14CZ0 275 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 MAPRE1Q15691 268 aaKnown RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 TMTC4Q5T4D3 741 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 ZNF683Q8IZ20 524 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 FBXO39Q8N4B4 442 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 MIPOL1Q8TD10 442 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 ZC3H15Q8WU90 426 aaKnown RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 KCTD14Q9BQ13 255 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 PRDM5Q9NQX1 630 aaPredicted RBP15.99■□□□□ 0.15
JRK-203ENST00000571961 SLAMF8Q9P0V8 285 aa15.99■□□□□ 0.15
JRK-203ENST00000571961 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms