RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 IGSF6O95976 241 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 ADH1CP00326 375 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 TYRP14679 529 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 ATP5F1P24539 256 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-208ENST00000571043 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.36
RPAIN-208ENST00000571043 SERPINB5P36952 375 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 EPHB1P54762 984 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 CDKN2DP55273 166 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 ZP2Q05996 745 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 CSHL1Q14406 222 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 PITRM1Q5JRX3 1037 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 PIH1D2Q8WWB5 315 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 BRD9Q9H8M2 597 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 PNPOQ9NVS9 261 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 LNPEPQ9UIQ6 1025 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 HAO1Q9UJM8 370 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 FBXO10Q9UK96 956 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 SORCS3Q9UPU3 1222 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 CRYL1Q9Y2S2 319 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 PCDHB9Q9Y5E1 797 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 MIA3Q5JRA6 1907 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 NCOR1O75376 2440 aa17.27■□□□□ 0.35
RPAIN-208ENST00000571043 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.35
RPAIN-208ENST00000571043 NEDD8-MDP1E9PL57 170 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 CCDC166P0CW27 439 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ADH5P11766 374 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 BMP1P13497 986 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 PFKPQ01813 784 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 BCL2L1Q07817 233 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 RCN2Q14257 317 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 GAB4Q2WGN9 574 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 NSL1Q96IY1 281 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 TM6SF2Q9BZW4 377 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ILKAPQ9H0C8 392 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 CDH19Q9H159 772 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 POLR3BQ9NW08 1133 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 GTSE1Q9NYZ3 720 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 APOBEC2Q9Y235 224 aaKnown RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 RAP2CQ9Y3L5 183 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ZNF711Q9Y462 761 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 TRIOO75962 3097 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ZNF195O14628 629 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 NPHS1O60500 1241 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 NDUFS3O75489 264 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 CBX6O95503 412 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ASGR2P07307 311 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 SERPINA6P08185 405 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 DMC1Q14565 340 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 TBCCQ15814 346 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ITPRIPL2Q3MIP1 535 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 AARS2Q5JTZ9 985 aaKnown RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 SPATA6LQ8N4H0 392 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 CPA6Q8N4T0 437 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 STON2Q8WXE9 905 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 LPGAT1Q92604 370 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 RILPQ96NA2 401 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 SLC2A11Q9BYW1 496 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 NMUR2Q9GZQ4 415 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 ATP13A3Q9H7F0 1226 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 IL17CQ9P0M4 197 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 EVLQ9UI08 416 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 HS3ST2Q9Y278 367 aa17.26■□□□□ 0.35
RPAIN-208ENST00000571043 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-208ENST00000571043 MYLKQ15746 1914 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 ZNF821O75541 412 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 HLA-FP30511 346 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 MC4RP32245 332 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 HMGCLP35914 325 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TTPAP49638 278 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 NAGLUP54802 743 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 KCNJ2P63252 427 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TIAL1Q01085 375 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■■■□ 23
RPAIN-208ENST00000571043 PRKAA1Q13131 559 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TUBB3Q13509 450 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TDGQ13569 410 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 FBXW10Q5XX13 1052 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 TMEM207Q6UWW9 146 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 PIWIL4Q7Z3Z4 852 aaKnown RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 CAMK1DQ8IU85 385 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 ETFBKMTQ8IXQ9 262 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 PNPLA1Q8N8W4 532 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 OR2AP1Q8NGE2 309 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 ANKRD49Q8WVL7 239 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 SLC7A6OSQ96CW6 309 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 ASB2Q96Q27 587 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 RAB3IPQ96QF0 476 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-208ENST00000571043 SMIM14Q96QK8 99 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 CEP44Q9C0F1 390 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 FKBPLQ9UIM3 349 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 PKP3Q9Y446 797 aa17.25■□□□□ 0.35
RPAIN-208ENST00000571043 F8W8V4 182 aa17.24■□□□□ 0.35
RPAIN-208ENST00000571043 SLCO1B7G3V0H7 640 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms