RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 SLC2A13Q96QE2 648 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 HHIPQ96QV1 700 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SLC9A7Q96T83 725 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CGREF1Q99674 301 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FAM213AQ9BRX8 229 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 C16orf70Q9BSU1 422 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MLPHQ9BV36 600 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 TIPINQ9BVW5 301 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CARD6Q9BX69 1037 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GPR62Q9BZJ7 368 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SHCBP1LQ9BZQ2 653 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TRIM4Q9C037 500 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF518BQ9C0D4 1074 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 KLHL4Q9C0H6 718 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 EPC1Q9H2F5 836 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ABHD16BQ9H3Z7 469 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TMEM206Q9H813 350 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MINDY3Q9H8M7 445 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 VIPAS39Q9H9C1 493 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ACP6Q9NPH0 428 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SERHLQ9NQF3 203 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 C8orf4Q9NR00 106 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 OXSMQ9NWU1 459 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TRNAU1APQ9NX07 287 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ARHGEF38Q9NXL2 777 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SMPD3Q9NY59 655 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ABI2Q9NYB9 513 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 PKD2L2Q9NZM6 624 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 H2AFY2Q9P0M6 372 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 KLHL9Q9P2J3 617 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKFY1Q9P2R3 1169 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TUBGCP4Q9UGJ1 667 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SUSD2Q9UGT4 822 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 DNAJC12Q9UKB3 198 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ATXN7L1Q9ULK2 861 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ABT1Q9ULW3 272 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 GUCA1BQ9UMX6 200 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PLAGL2Q9UPG8 496 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MAN2B2Q9Y2E5 1009 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PCDHGA5Q9Y5G8 931 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 NR2E3Q9Y5X4 410 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 USP3Q9Y6I4 520 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CAPN6Q9Y6Q1 641 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PLXNA4Q9HCM2 1894 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CNTNAP2Q9UHC6 1331 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 A0A087WZ62 844 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 C1orf232A0A0U1RR37 186 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FAM234BA2RU67 622 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GSAPA4D1B5 854 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MFSD2BA6NFX1 497 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 URADA6NGE7 173 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MANSC4A6NHS7 340 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 SLC15A5A6NIM6 579 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GLOD5A6NK44 160 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FAM170BA6NMN3 283 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SPECC1L-ADORA2AF8WAN1 911 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 K7ERI5 159 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GPR25O00155 361 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MYO1CO00159 1063 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 DYNC1LI2O43237 492 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 TBX1O43435 398 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MED7O43513 233 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FAM189A1O60320 539 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 HBP1O60381 514 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MSCO60682 206 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CTAG2O75638 210 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SEC24DO94855 1032 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 ERLIN2O94905 339 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LCA5LO95447 670 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 VNN1O95497 513 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CSTAP01040 98 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PIGRP01833 764 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 NTRK1P04629 796 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ATP1A1P05023 1023 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 SERPING1P05155 500 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PRKCBP05771 671 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GLAP06280 429 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LIPFP07098 398 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 EPHX1P07099 455 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CYC1P08574 325 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ERVK-10P10266 1014 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 OSMP13725 252 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ETS1P14921 441 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 RHOQP17081 205 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ITPKAP23677 461 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PTPN3P26045 913 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 KLRC1P26715 233 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 AOAHP28039 575 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CYLC1P35663 651 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 GRM5P41594 1212 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PTGER3P43115 390 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 RANBP1P43487 201 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 NAMPTP43490 491 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ACADSBP45954 432 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TUFMP49411 452 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 IDH3AP50213 366 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 IRAK1P51617 712 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 VAV2P52735 878 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 METAP1P53582 386 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms