RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PHEXP78562 749 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 MRPS21P82921 87 aaKnown RBP6.66□□□□□ -1.34
SMG1-217ENST00000569764 TBCEQ15813 527 aaPredicted RBP6.66□□□□□ -1.34
SMG1-217ENST00000569764 FAM76BQ5HYJ3 339 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 DUS1LQ6P1R4 473 aaKnown RBP6.66□□□□□ -1.34
SMG1-217ENST00000569764 DCUN1D2Q6PH85 259 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 OVCH2Q7RTZ1 564 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 ALYREFQ86V81 257 aaKnown RBP6.66□□□□□ -1.34
SMG1-217ENST00000569764 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 GRAMD1AQ96CP6 724 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 TMEM209Q96SK2 561 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 FAM213AQ9BRX8 229 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 LRFN3Q9BTN0 628 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 PREBQ9HCU5 417 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 GPRC5CQ9NQ84 441 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 DNAJC11Q9NVH1 559 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 ARHGAP20Q9P2F6 1191 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 WARS2Q9UGM6 360 aaKnown RBP6.66□□□□□ -1.34
SMG1-217ENST00000569764 HCFC2Q9Y5Z7 792 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 FAM169AQ9Y6X4 670 aa6.66□□□□□ -1.34
SMG1-217ENST00000569764 CHADO15335 359 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 PGLSO95336 258 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 TUBB4AP04350 444 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 OSMP13725 252 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 RBMS1P29558 406 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 ARSEP51690 589 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 CDH8P55286 799 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 POLE2P56282 527 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 ZNF200P98182 395 aaPredicted RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 E2F2Q14209 437 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 POLD3Q15054 466 aaPredicted RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 PFKFB4Q16877 469 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 DCAF6Q58WW2 860 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 GRTP1Q5TC63 336 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 SERPINA13PQ6UXR4 307 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 BZW1Q7L1Q6 419 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 ZC3H3Q8IXZ2 948 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 TEX47Q8TBZ9 253 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 RFKQ969G6 155 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 PNKPQ96T60 521 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 TRIM45Q9H8W5 580 aaPredicted RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 VCX3AQ9NNX9 186 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 OR6C2Q9NZP2 312 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 NAGPAQ9UK23 515 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 SCML1Q9UN30 329 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 CLCA3PQ9Y6N3 262 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 MGAMO43451 1857 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 A0A0G2JMZ2 1700 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 LRRC37A2A6NM11 1700 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 TMEM8BA6NDV4 472 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 PTP4A3O75365 173 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 RHOQP17081 205 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 VCLP18206 1134 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 CTSSP25774 331 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 HTR1BP28222 390 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 STAT5AP42229 794 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 PTGIRP43119 386 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 FNTAP49354 379 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 LGALS3BPQ08380 585 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 SCARA3Q6AZY7 606 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 ZC3H18Q86VM9 953 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 LONP2Q86WA8 852 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 OLIG1Q8TAK6 271 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 ST8SIA4Q92187 359 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 C18orf25Q96B23 403 aaPredicted RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 ABHD1Q96SE0 405 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 DHX33Q9H6R0 707 aaKnown RBP6.65□□□□□ -1.34
SMG1-217ENST00000569764 ERVW-1Q9UQF0 538 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 AP3M1Q9Y2T2 418 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 IRAK3Q9Y616 596 aa6.65□□□□□ -1.34
SMG1-217ENST00000569764 ZSCAN5BA6NJL1 495 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 KPNA7A9QM74 516 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 STBD1O95210 358 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 CCNDBP1O95273 360 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 GFAPP14136 432 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 TCN1P20061 433 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 RAB14P61106 215 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 TBL3Q12788 808 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 HGSNATQ68CP4 663 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 GJB7Q6PEY0 223 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PET117Q6UWS5 81 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MRPL10Q7Z7H8 261 aaKnown RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 KDM1BQ8NB78 822 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 TTLQ8NG68 377 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MAIP1Q8WWC4 291 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 OVCA2Q8WZ82 227 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 CHMP6Q96FZ7 201 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 ERGIC2Q96RQ1 377 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 WNT8AQ9H1J5 351 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 NRIP3Q9NQ35 241 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 DNPEPQ9ULA0 475 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 PACSIN2Q9UNF0 486 aaPredicted RBP6.65□□□□□ -1.35
SMG1-217ENST00000569764 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.35
SMG1-217ENST00000569764 MYH9P35579 1960 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms