RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ZNF534Q76KX8 674 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 PARGQ86W56 976 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
CNOT1-217ENST00000569263 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 PELI3Q8N2H9 469 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 MINDY1Q8N5J2 469 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 NAT8LQ8N9F0 302 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 BBOF1Q8ND07 529 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 MCUQ8NE86 351 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 FUBP1Q96AE4 644 aaKnown RBP12.99□□□□□ -0.33
CNOT1-217ENST00000569263 DNAJC1Q96KC8 554 aaKnown RBP12.99□□□□□ -0.33
CNOT1-217ENST00000569263 WDR92Q96MX6 357 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 ERP44Q9BS26 406 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 IL22Q9GZX6 179 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 DPH5Q9H2P9 285 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 GAREM1Q9H706 876 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 TMEM9BQ9NQ34 198 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 GPR27Q9NS67 375 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 FKBPLQ9UIM3 349 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 APPL1Q9UKG1 709 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 MYO15AQ9UKN7 3530 aa12.99□□□□□ -0.33
CNOT1-217ENST00000569263 SPTY2D1-AS1A0A0U1RR47 76 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 FADS2P1A8MWK0 482 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SMAPO00193 183 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SEC31AO94979 1220 aaKnown RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 PRAMEF1O95521 474 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SOD1P00441 154 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 HOXC4P09017 264 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 MLNP12872 115 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 IVDP26440 423 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 TRIM23P36406 574 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 CRADDP78560 199 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 CALCOCO2Q13137 446 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 FZD2Q14332 565 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SKIDA1Q1XH10 827 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 HLA-BQ31612 363 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 PCID2Q5JVF3 399 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 TPRG1LQ5T0D9 272 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 CASC4Q6P4E1 433 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 DOK6Q6PKX4 331 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ENPP7Q6UWV6 458 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 NLRP9Q7RTR0 991 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 OR2I1PQ8NGU4 316 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 STYXQ8WUJ0 223 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 HIC2Q96JB3 615 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ELF4Q99607 663 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 C19orf43Q9BQ61 176 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 TEX101Q9BY14 249 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 IL26Q9NPH9 171 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 NLE1Q9NVX2 485 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SYBUQ9NX95 663 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SAMD15Q9P1V8 674 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 KLQ9UEF7 1012 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ANAPC5Q9UJX4 755 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 SNX24Q9Y343 169 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 ZFHX2Q9C0A1 2572 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-217ENST00000569263 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
CNOT1-217ENST00000569263 MROH6A6NGR9 719 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 H3BM21 787 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 CCL22O00626 93 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 DFNA5O60443 496 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 AVILO75366 819 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ASMTLO95671 621 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ITGALP20701 1170 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 CCT8P50990 548 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ITGA8P53708 1063 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 CHRNA6Q15825 494 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ZNF423Q2M1K9 1284 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ZNF542PQ5EBM4 170 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 TSTD2Q5T7W7 516 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 TRIM74Q86UV6 250 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 MMGT1Q8N4V1 131 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 OR56A4Q8NGH8 313 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 GDAP1Q8TB36 358 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 PTCD2Q8WV60 388 aaKnown RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 CARD6Q9BX69 1037 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 LGR4Q9BXB1 951 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 FRMD8Q9BZ67 464 aaPredicted RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 SLC30A1Q9Y6M5 507 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 DMDP11532 3685 aa12.97□□□□□ -0.33
CNOT1-217ENST00000569263 TDRD6O60522 2096 aaKnown RBP12.97□□□□□ -0.33
CNOT1-217ENST00000569263 FRYLO94915 3013 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 A0A1B0GTQ1 180 aa12.96□□□□□ -0.33
CNOT1-217ENST00000569263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.96□□□□□ -0.33
CNOT1-217ENST00000569263 TMEM202A6NGA9 273 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms