RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 ZNF548Q8NEK5 533 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 CNDP2Q96KP4 475 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
CNOT1-213ENST00000568158 CDC6Q99741 560 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SPATA16Q9BXB7 569 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SLC13A1Q9BZW2 595 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 CYP4F12Q9HCS2 524 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 IL17CQ9P0M4 197 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SPASTQ9UBP0 616 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 SNX12Q9UMY4 172 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 KCTD3Q9Y597 815 aa12.94□□□□□ -0.34
CNOT1-213ENST00000568158 NEMP2A6NFY4 417 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TNFRSF10CO14798 259 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 YY2O15391 372 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 PSMD3O43242 534 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TNFSF14O43557 240 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 RASGRP1O95267 797 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ASMTLO95671 621 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TOP3BO95985 862 aaKnown RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 KELP23276 732 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 HMGCLP35914 325 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 BLKP51451 505 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 DNAJC3Q13217 504 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 INAVAQ3KP66 663 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ZNF648Q5T619 568 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ADAMTSL4Q6UY14 1074 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 GSTA5Q7RTV2 222 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 GLT6D1Q7Z4J2 308 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 GLRX5Q86SX6 157 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 OR4C6Q8NH72 309 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ATL2Q8NHH9 583 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 CCL4L1Q8NHW4 92 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 PDXPQ96GD0 296 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 HIC2Q96JB3 615 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 FRMD8Q9BZ67 464 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TMEM168Q9H0V1 697 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TRABDQ9H4I3 376 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ARNT2Q9HBZ2 717 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 PIH1D1Q9NWS0 290 aaKnown RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 HACD3Q9P035 362 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 FTSJ1Q9UET6 329 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 PLEKHM1Q9Y4G2 1056 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 ARL5AQ9Y689 179 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 OAS3Q9Y6K5 1087 aaKnown RBP12.93□□□□□ -0.34
CNOT1-213ENST00000568158 CSNK1G3Q9Y6M4 447 aa12.93□□□□□ -0.34
CNOT1-213ENST00000568158 PRSS38A1L453 326 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A9O60656 530 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 AP2A1O95782 977 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 ANXA6P08133 673 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 FTH1P19P0C7X4 201 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A6P19224 532 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A1P22309 533 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A4P22310 534 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 CA5AP35218 305 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A3P35503 534 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A5P35504 534 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 ACTN2P35609 894 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 FDFT1P37268 417 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 GRIA1P42261 906 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 TTC27Q6P3X3 843 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 MARK2Q7KZI7 788 aaKnown RBP12.92□□□□□ -0.34
CNOT1-213ENST00000568158 TRAM1L1Q8N609 369 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 CCDC89Q8N998 374 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 ACTRT1Q8TDG2 376 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 COX14Q96I36 57 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 APOLD1Q96LR9 279 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 PPP1R2P1Q96PQ5 205 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 CARS2Q9HA77 564 aaKnown RBP12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A7Q9HAW7 530 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A10Q9HAW8 530 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 UGT1A8Q9HAW9 530 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 RAD18Q9NS91 495 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 HOMER3Q9NSC5 361 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 NLGN3Q9NZ94 848 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 PAK5Q9P286 719 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 TMPRSS11EQ9UL52 423 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 SUFUQ9UMX1 484 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 SLC17A4Q9Y2C5 497 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 DGKBQ9Y6T7 804 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 LRP4O75096 1905 aa12.92□□□□□ -0.34
CNOT1-213ENST00000568158 STX7O15400 261 aaKnown RBP12.91□□□□□ -0.34
CNOT1-213ENST00000568158 PYGLP06737 847 aa12.91□□□□□ -0.34
CNOT1-213ENST00000568158 ADRB1P08588 477 aa12.91□□□□□ -0.34
CNOT1-213ENST00000568158 CKMT2P17540 419 aa12.91□□□□□ -0.34
CNOT1-213ENST00000568158 LPOP22079 712 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-213ENST00000568158 COILP38432 576 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-213ENST00000568158 GNPDA1P46926 289 aa12.91□□□□□ -0.34
CNOT1-213ENST00000568158 LMAN1P49257 510 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms