RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 RAET1GQ6H3X3 334 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 AADACL2Q6P093 401 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 IGF2-ASQ6U949 168 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 PID1Q7Z2X4 250 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC50Q8IVM0 306 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 TTC30BQ8N4P2 665 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 UBL4BQ8N7F7 174 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 ARL10Q8N8L6 244 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 WDR48Q8TAF3 677 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 SLC35B2Q8TB61 432 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 IFI44Q8TCB0 444 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 CCHCR1Q8TD31 782 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 PTCD2Q8WV60 388 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 SCG3Q8WXD2 468 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 NAT6Q93015 286 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 RTP4Q96DX8 246 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 PLEKHG4BQ96PX9 1271 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 TMEM168Q9H0V1 697 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 GBA3Q9H227 469 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 FAM83DQ9H4H8 585 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 RMI1Q9H9A7 625 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 MRPL40Q9NQ50 206 aaKnown RBP8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 PKD2L2Q9NZM6 624 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 HACD3Q9P035 362 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 PADI4Q9UM07 663 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 IGF2RP11717 2491 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 ZZEF1O43149 2961 aa8.14□□□□□ -1.11
HDGFL3-205ENST00000568129 TRABD2BA6NFA1 517 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 AGAP14A8MT82 685 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 AURKAO14965 403 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CHUKO15111 745 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 NUDT21O43809 227 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PPFIA2O75334 1257 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 TCEA3O75764 348 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 MT-CO3P00414 261 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 FGF1P05230 155 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 MYF5P13349 255 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 JUPP14923 745 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 GLB1P16278 677 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 BPIP17213 487 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 HLA-DPA1P20036 260 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PSMA3P25788 255 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 NAP1L1P55209 391 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 EIF3EP60228 445 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 DAB2P98082 770 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 TARDBPQ13148 414 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 LRP8Q14114 963 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 GALNT3Q14435 633 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 HLTFQ14527 1009 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ST3GAL2Q16842 350 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 SIRPB2Q5JXA9 342 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PERM1Q5SV97 790 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CERCAMQ5T4B2 595 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 MEI1Q5TIA1 1274 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZDHHC20Q5W0Z9 365 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 DENND2CQ68D51 928 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 GUSBP11Q6P575 273 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZNF438Q7Z4V0 828 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PROSER1Q86XN7 944 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 TRAM1L1Q8N609 369 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PAF1Q8N7H5 531 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 GPR26Q8NDV2 337 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CCL4L1Q8NHW4 92 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 HAUS1Q96CS2 278 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PPP1R2P1Q96PQ5 205 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 VPS35Q96QK1 796 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZSCAN5AQ9BUG6 496 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 RIOK2Q9BVS4 552 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 FRMD8P1Q9BZ68 369 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CYP4F12Q9HCS2 524 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 UBP1Q9NZI7 540 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 IL17CQ9P0M4 197 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 SEPT10Q9P0V9 454 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 KLHL8Q9P2G9 620 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CD84Q9UIB8 345 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 SUFUQ9UMX1 484 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 PACSIN2Q9UNF0 486 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 CLCA2Q9UQC9 943 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 AAR2Q9Y312 384 aaKnown RBP8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZNF711Q9Y462 761 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 TTLL3Q9Y4R7 772 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 SPO11Q9Y5K1 396 aa8.13□□□□□ -1.11
HDGFL3-205ENST00000568129 ZFHX4Q86UP3 3567 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 LAMA5O15230 3695 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 TCRBV7S2A1N4TA0A589 114 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 FAM149AA5PLN7 773 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 H7C0C1 242 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 GAPDHSO14556 408 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 NUAK1O60285 661 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 PMPCBO75439 489 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 ANXA9O76027 345 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms