RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RECQL4O94761 1208 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ITGBL1O95965 494 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 LGALS2P05162 132 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CKMP06732 381 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ASGR1P07306 291 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 UNGP13051 313 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TLX1P31314 330 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SOX11P35716 441 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CCT3P49368 545 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 GLUD2P49448 558 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CDH8P55286 799 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TUBA1BP68363 451 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MFSD10Q14728 455 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 AMHR2Q16671 573 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SHROOM1Q2M3G4 852 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 C15orf59Q2T9L4 293 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KCTD21Q4G0X4 260 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MFSD4BQ5TF39 518 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 GLYATQ6IB77 296 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KIAA0930Q6ICG6 404 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 VSTM1Q6UX27 236 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZDHHC24Q6UX98 284 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TUBA1AQ71U36 451 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ARL10Q8N8L6 244 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 GLIS3Q8NEA6 775 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 UBASH3BQ8TF42 649 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PPP1R16AQ96I34 528 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CSPG4P5Q96PW8 444 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 OSMRQ99650 979 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 FTHL17Q9BXU8 183 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ATP13A3Q9H7F0 1226 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF624Q9P2J8 865 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ELOVL7A1L3X0 281 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SMIM22K7EJ46 135 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 GABRDO14764 452 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZW10O43264 779 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PEX11AO75192 247 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CSDE1O75534 798 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SRPRAP08240 638 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 IRF1P10914 325 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 NOS3P29474 1203 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 IDH2P48735 452 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 HCAR3P49019 387 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PSEN2P49810 448 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 POLR2JP52435 117 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 AP3S2P59780 193 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 IKBKEQ14164 716 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MYBPC3Q14896 1274 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PRKD1Q15139 912 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TSC22D1Q15714 1073 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MAPK11Q15759 364 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 FBXO43Q4G163 708 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KHDC1Q4VXA5 237 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MACC1Q6ZN28 852 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CHMP1BQ7LBR1 199 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF467Q7Z7K2 595 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 HEATR4Q86WZ0 1026 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 FBXO16Q8IX29 292 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TRPV1Q8NER1 839 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 DNAJB14Q8TBM8 379 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SEC14L1Q92503 715 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SEMA4DQ92854 862 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CLP1Q92989 425 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZBTB45Q96K62 511 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 NODALQ96S42 347 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ADI1Q9BV57 179 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KAT8Q9H7Z6 458 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 GPN1Q9HCN4 374 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PNPOQ9NVS9 261 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 THUMPD1Q9NXG2 353 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KCTD5Q9NXV2 234 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 DNMT3LQ9UJW3 386 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PLA2G4CQ9UP65 541 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 LY75O60449 1722 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 TRIM43BA6NCK2 446 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 H0YC42 278 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 CSPG5O95196 566 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 IL1BP01584 269 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 RAP2AP10114 183 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 RHOQP17081 205 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 BMP7P18075 431 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 ITGB5P18084 799 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 ATN1P54259 1190 aaPredicted RBP4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 PTSQ03393 145 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 FPGSQ05932 587 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 SLC18A2Q05940 514 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 TRIM32Q13049 653 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 LAPTM5Q13571 262 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 PEX6Q13608 980 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 PTPRNQ16849 979 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 HKDC1Q2TB90 917 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 PLEKHG6Q3KR16 790 aa4.34□□□□□ -1.72
LPCAT2-208ENST00000566915 PTPN20Q4JDL3 420 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms