RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 UEVLDQ8IX04 471 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 C10orf53Q8N6V4 93 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 FAM47BQ8NA70 645 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 GJC3Q8NFK1 279 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 IL17DQ8TAD2 202 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 EXOC4Q96A65 974 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 CEP295NLQ96MC4 621 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 PI4K2AQ9BTU6 479 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 TUBB2BQ9BVA1 445 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 SCNM1Q9BWG6 230 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 SEZ6LQ9BYH1 1024 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 XPO4Q9C0E2 1151 aaKnown RBP5.9□□□□□ -1.46
KARS-208ENST00000566772 SLC28A3Q9HAS3 691 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 MAGEE1Q9HCI5 957 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 PARPBPQ9NWS1 579 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 ADPRHL2Q9NX46 363 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 STK26Q9P289 416 aa5.9□□□□□ -1.46
KARS-208ENST00000566772 NPHP3Q7Z494 1330 aa5.9□□□□□ -1.47
KARS-208ENST00000566772 PLCH1Q4KWH8 1693 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 IFT172Q9UG01 1749 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ARID1BQ8NFD5 2236 aaPredicted RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 KLK8O60259 260 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ATP2C2O75185 946 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 SNRNP70P08621 437 aaKnown RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 PCNAP12004 261 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ACTN1P12814 892 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 BMXP51813 675 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 CAPZA1P52907 286 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 TAS2R40P59535 323 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 SCN1BQ07699 218 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ACTN3Q08043 901 aaPredicted RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 KIAA1755Q5JYT7 1200 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 C6orf141Q5SZD1 244 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 RARS2Q5T160 578 aaKnown RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 TUSC5Q8IXB3 177 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 SLC44A3Q8N4M1 653 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ARL14EPQ8N8R7 260 aaPredicted RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 OR8K5Q8NH50 307 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 CFAP61Q8NHU2 1237 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 HUS1BQ8NHY5 278 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 IGSF8Q969P0 613 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 DAZAP1Q96EP5 407 aaKnown RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 TMEM47Q9BQJ4 181 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 TM2D2Q9BX73 214 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 ZNF341Q9BYN7 854 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 PCED1AQ9H1Q7 454 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 NRIP3Q9NQ35 241 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 PLEKHB1Q9UF11 243 aaPredicted RBP5.89□□□□□ -1.47
KARS-208ENST00000566772 SLC8A2Q9UPR5 921 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 LIPGQ9Y5X9 500 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 BRWD3Q6RI45 1802 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 HFM1A2PYH4 1435 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 MYOM2P54296 1465 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 PXDNQ92626 1479 aa5.89□□□□□ -1.47
KARS-208ENST00000566772 USP32Q8NFA0 1604 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 KIF1AQ12756 1690 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 EDDM13A0A1B0GTR0 161 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 WIPF3A6NGB9 483 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 KINO60870 393 aaKnown RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 KERAO60938 352 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 JRKO75564 520 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 SLC22A3O75751 556 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 TMCC1O94876 653 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 ZWINTO95229 277 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 C8AP07357 584 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 CD63P08962 238 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 SUPT20HL2P0C7V6 817 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 ETFAP13804 333 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 CTPS1P17812 591 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 HLA-DPA1P20036 260 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 MATR3P43243 847 aaKnown RBP eCLIP5.88□□□□□ -1.47
KARS-208ENST00000566772 CLCNKBP51801 687 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 GRSF1Q12849 480 aaKnown RBP eCLIP5.88□□□□□ -1.47
KARS-208ENST00000566772 KLF10Q13118 480 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 PRKD1Q15139 912 aaPredicted RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 SNAPC1Q16533 368 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 KRT24Q2M2I5 525 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 SMU1Q2TAY7 513 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 ARMC4Q5T2S8 1044 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 ZNF585AQ6P3V2 769 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 CNSTQ6PJW8 725 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 TRIM72Q6ZMU5 477 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 RBM44Q6ZP01 1051 aaKnown RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 TSPAN33Q86UF1 283 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 SLC35F3Q8IY50 421 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 IQUBQ8NA54 791 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 RBM15BQ8NDT2 890 aaKnown RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 TSPAN14Q8NG11 270 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 PIGKQ92643 395 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 CORO2AQ92828 525 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 EXTL1Q92935 676 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 RRNAD1Q96FB5 475 aaKnown RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 FCRL5Q96RD9 977 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
KARS-208ENST00000566772 ZNF703Q9H7S9 590 aaPredicted RBP5.88□□□□□ -1.47
KARS-208ENST00000566772 ACTR5Q9H9F9 607 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms