RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	MSLN	Q13421	630 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	TRIP6	Q15654	476 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	ALG11	Q2TAA5	492 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	INAVA	Q3KP66	663 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	PAPD7	Q5XG87	772 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	KCTD16	Q68DU8	428 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	ADAMTSL4	Q6UY14	1074 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	GLT6D1	Q7Z4J2	308 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	MAGOHB	Q96A72	148 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	NAPG	Q99747	312 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	SLC13A1	Q9BZW2	595 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	MRPL40	Q9NQ50	206 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	RAB6B	Q9NRW1	208 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	RAD18	Q9NS91	495 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	IL17C	Q9P0M4	197 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	PAK5	Q9P286	719 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	APOBEC3B	Q9UH17	382 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	MYLK	Q15746	1914 aa		13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	COL5A1	P20908	1838 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-215	ENST00000566682	CTAGE9	A4FU28	777 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	NEMP2	A6NFY4	417 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	ERI2	A8K979	691 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	FADS2P1	A8MWK0	482 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	TNFRSF10C	O14798	259 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	INPP4B	O15327	924 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	AQP9	O43315	295 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	BUD23	O43709	281 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	RASGRP1	O95267	797 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	TNF	P01375	233 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	GIMD1	P0DJR0	217 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	DCDC1	P59894	354 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	C1orf61	Q13536	156 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CYP1B1	Q16678	543 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	KCTD19	Q17RG1	926 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	PRRT3	Q5FWE3	981 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	ALS2CL	Q60I27	953 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	TTC27	Q6P3X3	843 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	BRSK1	Q8TDC3	778 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	LMX1A	Q8TE12	382 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	OR1E3	Q8WZA6	343 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	PDXP	Q96GD0	296 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	HIC2	Q96JB3	615 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CDC6	Q99741	560 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	LRRC61	Q9BV99	259 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	SPATA16	Q9BXB7	569 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CDH19	Q9H159	772 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CYP4F12	Q9HCS2	524 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	FGF22	Q9HCT0	170 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	SPAST	Q9UBP0	616 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	MOSPD1	Q9UJG1	213 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CNOT6	Q9ULM6	557 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	ARL5A	Q9Y689	179 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	SAR1B	Q9Y6B6	198 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CSNK1G3	Q9Y6M4	447 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	DGKB	Q9Y6T7	804 aa		13.61	□□□□□ -0.23
SPG7-215	ENST00000566682	CNOT1	A5YKK6	2376 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	SPAAR	A0A1B0GVQ0	90 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	PRSS38	A1L453	326 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682		E7EVH7	732 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TRIM38	O00635	465 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	SCAMP1	O15126	338 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	FANCG	O15287	622 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	FFAR2	O15552	330 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	FUCA1	P04066	466 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	CEACAM5	P06731	702 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	CTSE	P14091	401 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TPH1	P17752	444 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	LPO	P22079	712 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	COIL	P38432	576 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	POLD2	P49005	469 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	LMAN1	P49257	510 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	SEMA5A	Q13591	1074 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	PTPRCAP	Q14761	206 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TAF1A	Q15573	450 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	CCDC137	Q6PK04	289 aa	Known RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	C4orf22	Q6V702	233 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	LINC00523	Q86TU6	105 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TRIM74	Q86UV6	250 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TRAM1L1	Q8N609	369 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	COX14	Q96I36	57 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TBATA	Q96M53	351 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	PLEKHG4B	Q96PX9	1271 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	ZSCAN5A	Q9BUG6	496 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	CLPB	Q9H078	707 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	TMEM98	Q9Y2Y6	226 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	PKP3	Q9Y446	797 aa		13.6	□□□□□ -0.23
SPG7-215	ENST00000566682	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	C2orf81	A6NN90	581 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	STX7	O15400	261 aa	Known RBP	13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	SIGLEC6	O43699	453 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	PHF2	O75151	1096 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	SUN1	O94901	812 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	ASMTL	O95671	621 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	CRTAM	O95727	393 aa		13.59	□□□□□ -0.23
SPG7-215	ENST00000566682	LDOC1	O95751	146 aa	Predicted RBP	13.59	□□□□□ -0.23

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