RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 CHRNGP07510 517 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TROVE2P10155 538 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00562-201ENST00000566385 MYL2P10916 166 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF37AP17032 561 aaPredicted RBP11.3□□□□□ -0.6
LINC00562-201ENST00000566385 NAGLUP54802 743 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TECRLQ5HYJ1 363 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 PAQR3Q6TCH7 311 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 GDPD4Q6W3E5 623 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
LINC00562-201ENST00000566385 ISCA2Q86U28 154 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TXNDC5Q8NBS9 432 aaKnown RBP11.3□□□□□ -0.6
LINC00562-201ENST00000566385 RAB3IL1Q8TBN0 382 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TMEM120AQ9BXJ8 343 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 ALG9Q9H6U8 611 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 SARDHQ9UL12 918 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 USH1CQ9Y6N9 552 aa11.3□□□□□ -0.6
LINC00562-201ENST00000566385 TRIM13O60858 407 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 KIAA0754O94854 1291 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TGDSO95455 350 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 NFATC1O95644 943 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ADAM15Q13444 863 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 FAM83EQ2M2I3 478 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZYG11AQ6WRX3 759 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 MTDHQ86UE4 582 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF557Q8N988 423 aaPredicted RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 GPR21Q99679 349 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 HEPHQ9BQS7 1158 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 EBF4Q9BQW3 602 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 S1PR5Q9H228 398 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 MRPL46Q9H2W6 279 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ASB8Q9H765 288 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TRPV4Q9HBA0 871 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 CYP4F12Q9HCS2 524 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 DEC1Q9P2X7 70 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 CD84Q9UIB8 345 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 SLC30A1Q9Y6M5 507 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TFEBP19484 476 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 NNMTP40261 264 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 RECQLP46063 649 aaPredicted RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TTPAP49638 278 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ABCE1P61221 599 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 FCHO2Q0JRZ9 810 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 NFATC2Q13469 925 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 CHRNA6Q15825 494 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 CRLF3Q8IUI8 442 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF781Q8N8C0 355 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TSPAN17Q96FV3 270 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF641Q96N77 438 aaPredicted RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 MCCC1Q96RQ3 725 aaPredicted RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 TCF12Q99081 682 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF576Q9H609 170 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 FBRSL1Q9HCM7 1045 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 HCN2Q9UL51 889 aa11.29□□□□□ -0.6
LINC00562-201ENST00000566385 ZNF106Q9H2Y7 1883 aaKnown RBP11.29□□□□□ -0.6
LINC00562-201ENST00000566385 RHOBTB1O94844 696 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
LINC00562-201ENST00000566385 CD1DP15813 335 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 SERPINB3P29508 390 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 LTBRP36941 435 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 OPRD1P41143 372 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 SUOXP51687 545 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 ARFIP2P53365 341 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 AQP5P55064 265 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 CACNG1Q06432 222 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 RAD51Q06609 339 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
LINC00562-201ENST00000566385 DBN1Q16643 649 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 VWA5B1Q5TIE3 1220 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 AGAP9Q5VTM2 703 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 MAVSQ7Z434 540 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 TTC7BQ86TV6 843 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 SERPINA9Q86WD7 417 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 SIDT2Q8NBJ9 832 aaKnown RBP11.28□□□□□ -0.6
LINC00562-201ENST00000566385 PIWIL2Q8TC59 973 aaKnown RBP11.28□□□□□ -0.6
LINC00562-201ENST00000566385 ERP27Q96DN0 273 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 PHF21BQ96EK2 531 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
LINC00562-201ENST00000566385 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 HEY2Q9UBP5 337 aa11.28□□□□□ -0.6
LINC00562-201ENST00000566385 PLA2G4CQ9UP65 541 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms