RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.71■□□□□ 0.59
ABCA3-204ENST00000566200 OR4D9Q8NGE8 314 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 LRRN4Q8WUT4 740 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 NKD1Q969G9 470 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 WDR24Q96S15 920 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 FUCA2Q9BTY2 467 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 NUP85Q9BW27 656 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 TDRD1Q9BXT4 1180 aaKnown RBP18.71■□□□□ 0.59
ABCA3-204ENST00000566200 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
ABCA3-204ENST00000566200 PCDHGA3Q9Y5H0 932 aa18.71■□□□□ 0.59
ABCA3-204ENST00000566200 INPP4BO15327 924 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 FASLGP48023 281 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 ITKQ08881 620 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 NIPAL4Q0D2K0 466 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 TRA2AQ13595 282 aaKnown RBP eCLIP18.7■□□□□ 0.58
ABCA3-204ENST00000566200 TMEM164Q5U3C3 297 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 PRICKLE2Q7Z3G6 844 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 LRRC49Q8IUZ0 686 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 ARRDC2Q8TBH0 407 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 SLC37A2Q8TED4 501 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 TAAR9Q96RI9 348 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 RIOK2Q9BVS4 552 aaKnown RBP18.7■□□□□ 0.58
ABCA3-204ENST00000566200 SLC12A9Q9BXP2 914 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 CLMPQ9H6B4 373 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 OCIAD1Q9NX40 245 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 KCNK4Q9NYG8 393 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 AKAP7Q9P0M2 348 aaPredicted RBP18.7■□□□□ 0.58
ABCA3-204ENST00000566200 CNOT6Q9ULM6 557 aaKnown RBP18.7■□□□□ 0.58
ABCA3-204ENST00000566200 CHKBQ9Y259 395 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 B3GALT1Q9Y5Z6 326 aa18.7■□□□□ 0.58
ABCA3-204ENST00000566200 OAS3Q9Y6K5 1087 aaKnown RBP18.7■□□□□ 0.58
ABCA3-204ENST00000566200 TRBV23OR9-2A0A075B6M9 112 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 STMND1H3BQB6 276 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 MATN3O15232 486 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 DNAJC6O75061 913 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 WISP1O95388 367 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 SERPINC1P01008 464 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 ZNF30P17039 623 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 BIRC2Q13490 618 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 CLCA4Q14CN2 919 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.69■□□□□ 0.58
ABCA3-204ENST00000566200 SFRP1Q8N474 314 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 SYN2Q92777 582 aaPredicted RBP18.69■□□□□ 0.58
ABCA3-204ENST00000566200 ART4Q93070 314 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 ARHGAP9Q9BRR9 750 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 PDP2Q9P2J9 529 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 NENFQ9UMX5 172 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 PRKAB1Q9Y478 270 aa18.69■□□□□ 0.58
ABCA3-204ENST00000566200 CYSRT1A8MQ03 144 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 ZW10O43264 779 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 CLDN7O95471 211 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 ATP1A1P05023 1023 aaKnown RBP18.68■□□□□ 0.58
ABCA3-204ENST00000566200 SERPING1P05155 500 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 HLA-DQB2P05538 268 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 UGT1A3P35503 534 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 PEX6Q13608 980 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 TMEM71Q6P5X7 295 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 GALNT13Q8IUC8 556 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 NRSN1Q8IZ57 195 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 NDUFAF2Q8N183 169 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 BMPERQ8N8U9 685 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 AGBL5Q8NDL9 886 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 EXD1Q8NHP7 514 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 FATE1Q969F0 183 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 TSGA13Q96PP4 275 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 LYSMD1Q96S90 227 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 DDA1Q9BW61 102 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 TRIM4Q9C037 500 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 FAM117AQ9C073 453 aa18.68■□□□□ 0.58
ABCA3-204ENST00000566200 RBM22Q9NW64 420 aaKnown RBP eCLIP18.68■□□□□ 0.58
ABCA3-204ENST00000566200 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
ABCA3-204ENST00000566200 FADS2P1A8MWK0 482 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 MYO1FO00160 1098 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 CCNCP24863 283 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 SSR1P43307 286 aaKnown RBP18.67■□□□□ 0.58
ABCA3-204ENST00000566200 EPHB1P54762 984 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 TAS2R40P59535 323 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 GPLD1P80108 840 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 KCNC4Q03721 635 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 GBE1Q04446 702 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 SLC10A2Q12908 348 aaPredicted RBP18.67■□□□□ 0.58
ABCA3-204ENST00000566200 LRP8Q14114 963 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 IFI16Q16666 785 aaKnown RBP18.67■□□□□ 0.58
ABCA3-204ENST00000566200 ANKRD20A8PQ5CZ79 823 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 CAVIN1Q6NZI2 390 aaKnown RBP18.67■□□□□ 0.58
ABCA3-204ENST00000566200 PQLC3Q8N755 202 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 ZSCAN1Q8NBB4 408 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 TBC1D29Q9UFV1 150 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 AMACRQ9UHK6 382 aa18.67■□□□□ 0.58
ABCA3-204ENST00000566200 A6NCN8 305 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 TERTO14746 1132 aaKnown RBP18.66■□□□□ 0.58
ABCA3-204ENST00000566200 ASMTLO95671 621 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 PYGLP06737 847 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 MMP2P08253 660 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 LIFP15018 202 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 CSTF2P33240 577 aaKnown RBP eCLIP18.66■□□□□ 0.58
ABCA3-204ENST00000566200 GJC1P36383 396 aa18.66■□□□□ 0.58
ABCA3-204ENST00000566200 FANCCQ00597 558 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms