RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SP110Q9HB58 689 aa12.68□□□□□ -0.38
RNF40-208ENST00000565995 APMAPQ9HDC9 416 aa12.68□□□□□ -0.38
RNF40-208ENST00000565995 SIDT1Q9NXL6 827 aaKnown RBP12.68□□□□□ -0.38
RNF40-208ENST00000565995 AP4E1Q9UPM8 1137 aa12.68□□□□□ -0.38
RNF40-208ENST00000565995 PCDHGC4Q9Y5F7 938 aa12.68□□□□□ -0.38
RNF40-208ENST00000565995 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 NPIPB15A6NHN6 443 aaPredicted RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 SMTNL1A8MU46 457 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 K7EM74 188 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 POLR1CO15160 346 aaPredicted RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 EML2O95834 649 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 CPP00450 1065 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 PYGLP06737 847 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 ERCC2P18074 760 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 F8A1P23610 371 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 CA9Q16790 459 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 HSP90AA4PQ58FG1 418 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 RAET1GQ6H3X3 334 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 IYDQ6PHW0 289 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 RFX8Q6ZV50 586 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 ZNF765Q7L2R6 523 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 LUZP1Q86V48 1076 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 PSTKQ8IV42 348 aaKnown RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 ARFGAP1Q8N6T3 406 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 NPWQ8N729 165 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 TEX19Q8NA77 164 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 SH3KBP1Q96B97 665 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 ABCG8Q9H221 673 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 SUDS3Q9H7L9 328 aaPredicted RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 CBX8Q9HC52 389 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 PRDM8Q9NQV8 689 aa12.67□□□□□ -0.38
RNF40-208ENST00000565995 SAMSN1Q9NSI8 373 aaKnown RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 PLEKHB1Q9UF11 243 aaPredicted RBP12.67□□□□□ -0.38
RNF40-208ENST00000565995 MN1Q10571 1320 aaPredicted RBP12.66□□□□□ -0.38
RNF40-208ENST00000565995 DOPEY1Q5JWR5 2465 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 SEC16AO15027 2179 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 A6NCN8 305 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 A8MU76 341 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 EPHB6O15197 1021 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 GPR1P46091 355 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 MLLT10P55197 1068 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 HHEXQ03014 270 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 PTSQ03393 145 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
RNF40-208ENST00000565995 CYP4V2Q6ZWL3 525 aaPredicted RBP12.66□□□□□ -0.38
RNF40-208ENST00000565995 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 APLFQ8IW19 511 aaPredicted RBP12.66□□□□□ -0.38
RNF40-208ENST00000565995 MCOLN2Q8IZK6 566 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 GALNT11Q8NCW6 608 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 DHX35Q9H5Z1 703 aaKnown RBP12.66□□□□□ -0.38
RNF40-208ENST00000565995 NOD2Q9HC29 1040 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 NLRC4Q9NPP4 1024 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 VPS18Q9P253 973 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 TMEM98Q9Y2Y6 226 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 PCDHGA6Q9Y5G7 932 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 RPS6KL1Q9Y6S9 549 aa12.66□□□□□ -0.38
RNF40-208ENST00000565995 SPTBP11277 2137 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 TTC24A2A3L6 582 aaPredicted RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 DFFAO00273 331 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 TOX3O15405 576 aaPredicted RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 FZD6O60353 706 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 DNAJC6O75061 913 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 PGLSO95336 258 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 C9P02748 559 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 KRT7P08729 469 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 FURINP09958 794 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 ZNF30P17039 623 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 DESP17661 470 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 KLK7P49862 253 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 TRAF2Q12933 501 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 DPYSQ14117 519 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 ATP1A1-AS1Q5TC04 95 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 DENND2CQ68D51 928 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 ACAD10Q6JQN1 1059 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 C16orf46Q6P387 395 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 DCUN1D2Q6PH85 259 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 TSPAN33Q86UF1 283 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 GALNT13Q8IUC8 556 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 TP53INP2Q8IXH6 220 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 PAF1Q8N7H5 531 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 EXD1Q8NHP7 514 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 ENOX1Q8TC92 643 aaKnown RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 NCSTNQ92542 709 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 PEBP4Q96S96 227 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 KCTD15Q96SI1 283 aaPredicted RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms