RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CDK3Q00526 305 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 ILKQ13418 452 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 P3H1Q32P28 736 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 CCDC157Q569K6 752 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 SIRPB2Q5JXA9 342 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 LYSMD3Q7Z3D4 306 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 PRELID2Q8N945 189 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 SCAMP4Q969E2 229 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 EID2BQ96D98 161 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 CLPBQ9H078 707 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 FAM83DQ9H4H8 585 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 FGF22Q9HCT0 170 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 SHOC2Q9UQ13 582 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
HERPUD1-210ENST00000565966 ACACBO00763 2458 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 CES2O00748 559 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 YY2O15391 372 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 SOD1P00441 154 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 IFNB1P01574 187 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 FGF1P05230 155 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 CKMT1AP12532 417 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 OLIG2Q13516 323 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 KCTD11Q693B1 232 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 ADAMTSL4Q6UY14 1074 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 PRUNE1Q86TP1 453 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 C17orf53Q8N3J3 647 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 GLIS1Q8NBF1 620 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 ACTRT1Q8TDG2 376 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 OR1E3Q8WZA6 343 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 GLMNQ92990 594 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 PDXPQ96GD0 296 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 APOL2Q9BQE5 337 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 GPR63Q9BZJ6 419 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 CDH19Q9H159 772 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 CYP4F12Q9HCS2 524 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 NCKIPSDQ9NZQ3 722 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 MOSPD1Q9UJG1 213 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 KLK13Q9UKR3 277 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 CHD8Q9HCK8 2581 aa13.76□□□□□ -0.21
HERPUD1-210ENST00000565966 PRSS38A1L453 326 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 AURKAO14965 403 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 ZNF185O15231 689 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 CEACAM5P06731 702 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 ETS1P14921 441 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 TCP1P17987 556 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 KCNJ1P48048 391 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 E2F1Q01094 437 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 SPARCL1Q14515 664 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 C6orf132Q5T0Z8 1188 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 HENMT1Q5T8I9 393 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 KCTD16Q68DU8 428 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 DENND5AQ6IQ26 1287 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 TTC30BQ8N4P2 665 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 NAP1L3Q99457 506 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 TBL1YQ9BQ87 522 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 BOCQ9BWV1 1114 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 TRABDQ9H4I3 376 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 ARNT2Q9HBZ2 717 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
HERPUD1-210ENST00000565966 CEP295Q9C0D2 2601 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 FANCGO15287 622 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 PSMD3O43242 534 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 USP12O75317 370 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 SLC4A1P02730 911 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 ZSCAN5DPP0CG00 497 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 ACTN2P35609 894 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 FDFT1P37268 417 aa13.74□□□□□ -0.21
HERPUD1-210ENST00000565966 RPIAP49247 311 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms