RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CTAGE15A4D2H0 777 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 H3BNC9 293 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 IGLV2-14P01704 120 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CTAGE8P0CG41 777 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 MATN1P21941 496 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 KCNA5P22460 613 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ZSCAN26Q16670 478 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ZNF474Q6S9Z5 364 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 C1orf122Q6ZSJ8 110 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ARMCX2Q7L311 632 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 TLK2Q86UE8 772 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CTAGE6Q86UF2 777 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CTAGE4Q8IX94 777 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 UBALD2Q8IYN6 164 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 EME1Q96AY2 570 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 NAPGQ99747 312 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 RNF26Q9BY78 433 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 PARD6BQ9BYG5 372 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 NACAP1Q9BZK3 213 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 SLC22A11Q9NSA0 550 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ATP8A2Q9NTI2 1148 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ZNHIT6Q9NWK9 470 aaKnown RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 NYAP2Q9P242 653 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ADD3Q9UEY8 706 aaKnown RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CD207Q9UJ71 328 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 PKP3Q9Y446 797 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ERICH2A1L162 156 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 WIPF3A6NGB9 483 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 GJB5O95377 273 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CALM1P0DP23 149 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CALM2P0DP24 149 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CALM3P0DP25 149 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 IL9P15248 144 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 GPD1P21695 349 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 MMP8P22894 467 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ADORA1P30542 326 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 ICAM3P32942 547 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 PGM1P36871 562 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CCL23P55773 120 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 POLE2P56282 527 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 BLOC1S1P78537 153 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 TBC1D25Q3MII6 688 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 BEND6Q5SZJ8 279 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 BOLLQ8N9W6 283 aaKnown RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CCDC148Q8NFR7 591 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CCDC12Q8WUD4 166 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CHURC1Q8WUH1 139 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 PIGKQ92643 395 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 APBB2Q92870 758 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 SKA1Q96BD8 255 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 TBATAQ96M53 351 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 CDCA3Q99618 268 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 Q9N2J8 555 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 RBM28Q9NW13 759 aaKnown RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 LIMA1Q9UHB6 759 aaKnown RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 SLC25A13Q9UJS0 675 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 FBXO2Q9UK22 296 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 GDAQ9Y2T3 454 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 TANC1Q9C0D5 1861 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 PCNTO95613 3336 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PRR23AA6NEV1 266 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 LOC730098B7Z3J9 87 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PRRT4C9JH25 899 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 C5orf67F2Z3F1 127 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 MBTPS2O43462 519 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 ARHGAP8P85298 464 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PNOCQ13519 176 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 THOC5Q13769 683 aaKnown RBP4.34□□□□□ -1.71
LINC00561-201ENST00000565815 DUSP28Q4G0W2 176 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 WDR45BQ5MNZ6 344 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 GBP6Q6ZN66 633 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 RPAINQ86UA6 219 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 BRSK2Q8IWQ3 736 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 SCAIQ8N9R8 606 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 CHFRQ96EP1 664 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 APOPT1Q96IL0 206 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PPM1MQ96MI6 270 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 TIMP4Q99727 224 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 DUSP26Q9BV47 211 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 HAUS4Q9H6D7 363 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 YY1AP1Q9H869 796 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 MAGEF1Q9HAY2 307 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 LY9Q9HBG7 655 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 NOD2Q9HC29 1040 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PLEKHB1Q9UF11 243 aaPredicted RBP4.34□□□□□ -1.71
LINC00561-201ENST00000565815 ATXN2Q99700 1313 aaKnown RBP4.34□□□□□ -1.71
LINC00561-201ENST00000565815 RALGAPA2Q2PPJ7 1873 aa4.34□□□□□ -1.71
LINC00561-201ENST00000565815 PARP14Q460N5 1801 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 LINC01553A4QN01 128 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 GCOM1H8Y6P7 765 aaPredicted RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 MPHOSPH10O00566 681 aaKnown RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 CAPN3P20807 821 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 MARCKSP29966 332 aaPredicted RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 HARS2P49590 506 aaKnown RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 CASP6P55212 293 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 TIMM10P62072 90 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 KRT83P78385 493 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 GPM6BQ13491 265 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 BYSLQ13895 437 aaKnown RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms