RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PCP4P48539 62 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 NUMBP49757 651 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CLCN5P51795 746 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 TKTL1P51854 596 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PMS1P54277 932 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CACNB3P54284 484 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 AQP5P55064 265 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CDH4P55283 916 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CDH6P55285 790 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PRMT2P55345 433 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CD81P60033 236 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SLC25A3Q00325 362 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ABRQ12979 859 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CLN3Q13286 438 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 KCNAB2Q13303 367 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DMP1Q13316 513 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CTTNQ14247 550 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF267Q14586 743 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 FAM214AQ32MH5 1076 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 UGT3A2Q3SY77 523 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RNF212Q495C1 297 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CDNFQ49AH0 187 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 GPR33Q49SQ1 333 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DNLZQ5SXM8 178 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PDSS1Q5T2R2 415 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 GPATCH4Q5T3I0 446 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PPP1R26Q5T8A7 1209 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DCAF12L1Q5VU92 463 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 XRRA1Q6P2D8 792 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 LYPD8Q6UX82 237 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ETV3LQ6ZN32 361 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SLC16A12Q6ZSM3 486 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 TPGS1Q6ZTW0 290 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RAB11FIP2Q7L804 512 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZER1Q7Z7L7 766 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RASAL3Q86YV0 1011 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 HIPK1Q86Z02 1210 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZDHHC13Q8IUH4 622 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CDKL3Q8IVW4 592 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PHC2Q8IXK0 858 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZC3H3Q8IXZ2 948 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CARFQ8N187 725 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF781Q8N8C0 355 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SMG8Q8ND04 991 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PPHLN1Q8NEY8 458 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZFP90Q8TF47 636 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 GTF3C2Q8WUA4 911 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 HTRA1Q92743 480 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 LPPQ93052 612 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RBPMSQ93062 196 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 FKBP10Q96AY3 582 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 NXNL1Q96CM4 212 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CCDC124Q96CT7 223 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM41AQ96HV5 264 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 VCPIP1Q96JH7 1222 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 QRFPRQ96P65 431 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 OR5M11Q96RB7 305 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SLC9A7Q96T83 725 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SLC26A6Q9BXS9 759 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ANO3Q9BYT9 981 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 FRMD8P1Q9BZ68 369 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 UCK2Q9BZX2 261 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 BLZF1Q9H2G9 400 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 OPA3Q9H6K4 179 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CATSPERBQ9H7T0 1116 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ERVK-5Q9HDB9 667 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 EQTNQ9NQ60 294 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PRDM5Q9NQX1 630 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 LYARQ9NX58 379 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DUS2Q9NX74 493 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DPP3Q9NY33 737 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF224Q9NZL3 707 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SH3BP4Q9P0V3 963 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DNAJB9Q9UBS3 223 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SRP68Q9UHB9 627 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SNCAIPQ9Y6H5 919 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 LAMB1P07942 1786 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ADGRF5Q8IZF2 1346 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 FAM237BA0A1B0GVD1 139 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 TCRBV3S1A0A5B6 114 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 E2F8A0AVK6 867 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 FAM221BA6H8Z2 402 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 TMEM191CA6NGB0 347 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 AQP12BA6NM10 295 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 CLDN24A6NM45 220 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
PTPN9-204ENST00000564970 SULT1C2O00338 296 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 BTN3A3O00478 584 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 PHYHO14832 338 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 TO15178 435 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 EPHB6O15197 1021 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 OGTO15294 1046 aa6.27□□□□□ -1.41
PTPN9-204ENST00000564970 TP73O15350 636 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms