RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 NFKBIEO00221 500 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CNTN5O94779 1100 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 POU4F1Q01851 419 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ARL13BQ3SXY8 428 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 C8orf82Q6P1X6 216 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ISCA2Q86U28 154 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RIOX2Q8IUF8 465 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AQP12AQ8IXF9 295 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZFP90Q8TF47 636 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FAR2Q96K12 515 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FUNDC2Q9BWH2 189 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 POU2F3Q9UKI9 436 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PSME2Q9UL46 239 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NUP214P35658 2090 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 A6NL46 340 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TSPAN3O60637 253 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HLCSP50747 726 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CLYBLQ8N0X4 340 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SFRP1Q8N474 314 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FBXO30Q8TB52 745 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ADAMTS16Q8TE57 1224 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MAF1Q9H063 256 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GLOD4Q9HC38 313 aa20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TRIM64CA6NLI5 447 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AGRPO00253 132 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 IMPDH1P20839 514 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GGT5P36269 586 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DNAJB13P59910 316 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 IFITM3Q01628 133 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TMEM236Q5W0B7 351 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 XAF1Q6GPH4 301 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZUFSPQ96AP4 578 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ROPN1LQ96C74 230 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TNIP3Q96KP6 325 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 POLG2Q9UHN1 485 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PNMA8BQ9ULN7 279 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 INVSQ9Y283 1065 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 BCAS1O75363 584 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MBL2P11226 248 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HPCAL1P37235 193 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 KPNA2P52292 529 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ACAP2Q15057 778 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SLC2A7Q6PXP3 512 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TFAP2DQ7Z6R9 452 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 KIAA2013Q8IYS2 634 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FAM86B1Q8N7N1 296 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NT5C3BQ969T7 300 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TMBIM1Q969X1 311 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DUS3LQ96G46 650 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FEM1CQ96JP0 617 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DOK1Q99704 481 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SLC39A8Q9C0K1 460 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FAM50BQ9Y247 325 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AAR2Q9Y312 384 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CPQQ9Y646 472 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ENPP3O14638 875 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AZIN1O14977 448 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TGFBR1P36897 503 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 YWHAHQ04917 246 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 LAPTM4AQ15012 233 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FAM187BQ17R55 369 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CCDC81Q6ZN84 652 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SPRED1Q7Z699 444 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CASP10Q92851 521 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TMEM125Q96AQ2 219 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 IL12RB2Q99665 862 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HOPXQ9BPY8 73 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SIAEQ9HAT2 523 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GNPTGQ9UJJ9 305 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PCDHGA8Q9Y5G5 932 aa20.42■□□□□ 0.86
MAP1LC3B-206ENST00000564844 H3BRB1 525 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZNF701M0R085 212 aaPredicted RBP20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 XPNPEP2O43895 674 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RBP1P09455 135 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TAF6P49848 677 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 WNT3AP56704 352 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 LILRA4P59901 499 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PSMD5Q16401 504 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 BROXQ5VW32 411 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 LCN8Q6JVE9 175 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TRUB1Q8WWH5 349 aaKnown RBP20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MEIS3P2A8K0S8 358 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 H0Y858 1186 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ESRRBO95718 433 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PAMP19021 973 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HTR1BP28222 390 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DAOAP59103 153 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SEMA3BQ13214 749 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SELPLGQ14242 412 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZNF773Q6PK81 442 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SLCO6A1Q86UG4 719 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SLC22A17Q8WUG5 538 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MRGPRX2Q96LB1 330 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CDK15Q96Q40 435 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NT5MQ9NPB1 228 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TLR9Q9NR96 1032 aa20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 KLQ9UEF7 1012 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms