RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PCDHB11Q9Y5F2 797 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 AKR1B10O60218 316 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 C1QL1O75973 258 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC2A4P14672 509 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 AK4P27144 223 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 CD1CP29017 333 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ALDH4A1P30038 563 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ACTR1BP42025 376 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC1A1P43005 524 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 FASLGP48023 281 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 POLD2P49005 469 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SPINT3P49223 89 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 LIMK2P53671 638 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 MAZP56270 477 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 OR1D5P58170 312 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 TAS2R40P59535 323 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ACTR1AP61163 376 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 IFI35P80217 286 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 DSC2Q02487 901 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 GBE1Q04446 702 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC10A2Q12908 348 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ZSCAN23Q3MJ62 389 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 PHF19Q5T6S3 580 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC30A9Q6PML9 568 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 RHOT2Q8IXI1 618 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 NAGSQ8N159 534 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 AVL9Q8NBF6 648 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC35G2Q8TBE7 412 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 SH3KBP1Q96B97 665 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 RIOK2Q9BVS4 552 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 FAM83DQ9H4H8 585 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 RAD18Q9NS91 495 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 PKD2L2Q9NZM6 624 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
GTF3C1-204ENST00000564664 OR5K4A6NMS3 321 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 GPR89AB7ZAQ6 455 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 MTA2O94776 668 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 CLDN7O95471 211 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 JCHAINP01591 159 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 PRB1P04280 392 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 ITGB2P05107 769 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 HLA-DQB2P05538 268 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 GPR89BP0CG08 455 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 HGFP14210 728 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 IHHQ14623 411 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 MESDQ14696 234 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 PDK1Q15118 436 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC14A2Q15849 920 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 AMZ1Q400G9 498 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 ODF2Q5BJF6 829 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 TMEM71Q6P5X7 295 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 RFLNAQ6ZTI6 216 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 USP53Q70EK8 1073 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 SFTPA2Q8IWL1 248 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 ZSCAN1Q8NBB4 408 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 CCDC112Q8NEF3 446 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 LPCAT1Q8NF37 534 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 USP7Q93009 1102 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 CCDC42Q96M95 316 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 MAGEE1Q9HCI5 957 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 PDP2Q9P2J9 529 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 ZNHIT2Q9UHR6 403 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 INTUQ9ULD6 942 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 CNOT6Q9ULM6 557 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 TTLL3Q9Y4R7 772 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 PCDHGA3Q9Y5H0 932 aa12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 GCN1Q92616 2671 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-204ENST00000564664 IGHV1OR21-1A0A087WYE8 117 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 IGHV5-10-1A0A0J9YXX1 117 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PPP1R12AO14974 1030 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PPM1DO15297 605 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 EFSO43281 561 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 DNAJC6O75061 913 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 ASMTLO95671 621 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 MMP2P08253 660 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SFTPCP11686 197 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 GJC1P36383 396 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 CLCNKAP51800 687 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms