RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PYCR3Q53H96 274 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 TMEM164Q5U3C3 297 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 SLC30A9Q6PML9 568 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 JAMLQ86YT9 394 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 GALNT13Q8IUC8 556 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 SLC35G2Q8TBE7 412 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.92□□□□□ -0.02
SPG7-210ENST00000564409 SCAMP4Q969E2 229 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 CCDC42Q96M95 316 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 MLPHQ9BV36 600 aaPredicted RBP14.92□□□□□ -0.02
SPG7-210ENST00000564409 MAK16Q9BXY0 300 aaKnown RBP14.92□□□□□ -0.02
SPG7-210ENST00000564409 PACSIN1Q9BY11 444 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 PKD2L2Q9NZM6 624 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 INTUQ9ULD6 942 aa14.92□□□□□ -0.02
SPG7-210ENST00000564409 MGAQ8IWI9 3026 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 LRRD1A4D1F6 860 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 B4GAT1O43505 415 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 JCHAINP01591 159 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 LIPCP11150 499 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 AK4P27144 223 aaPredicted RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 ALDH4A1P30038 563 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 ACTR1BP42025 376 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SLC1A1P43005 524 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 FASLGP48023 281 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 POLD2P49005 469 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SPINT3P49223 89 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 MAZP56270 477 aaKnown RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 ACTR1AP61163 376 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 GPLD1P80108 840 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 NIPAL4Q0D2K0 466 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SLC10A2Q12908 348 aaPredicted RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 MESDQ14696 234 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 PDK1Q15118 436 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 PTPRRQ15256 657 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SLC14A2Q15849 920 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 PHF19Q5T6S3 580 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SLC9A4Q6AI14 798 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 XKR5Q6UX68 686 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SFTPA2Q8IWL1 248 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 NAGSQ8N159 534 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 LPCAT1Q8NF37 534 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 RAPGEF5Q92565 580 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SRPK1Q96SB4 655 aaKnown RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 RIOK2Q9BVS4 552 aaKnown RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 FAM83DQ9H4H8 585 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 SUDS3Q9H7L9 328 aaPredicted RBP14.91□□□□□ -0.02
SPG7-210ENST00000564409 RAD18Q9NS91 495 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 PISDQ9UG56 409 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 CD84Q9UIB8 345 aa14.91□□□□□ -0.02
SPG7-210ENST00000564409 C1orf232A0A0U1RR37 186 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 GPR89AB7ZAQ6 455 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 PPP1R12AO14974 1030 aaPredicted RBP14.9□□□□□ -0.02
SPG7-210ENST00000564409 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 CLDN7O95471 211 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 GPR89BP0CG08 455 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 SLC2A4P14672 509 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 OR1D5P58170 312 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 CFHR1Q03591 330 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 IHHQ14623 411 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 QPCTQ16769 361 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 HENMT1Q5T8I9 393 aaKnown RBP14.9□□□□□ -0.02
SPG7-210ENST00000564409 DOK6Q6PKX4 331 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 RFLNAQ6ZTI6 216 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 BZW1Q7L1Q6 419 aaKnown RBP14.9□□□□□ -0.02
SPG7-210ENST00000564409 CPNE8Q86YQ8 564 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 VSTM4Q8IW00 320 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 PLD5Q8N7P1 536 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 AVL9Q8NBF6 648 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 CCDC112Q8NEF3 446 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 OR4D9Q8NGE8 314 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 NHEJ1Q9H9Q4 299 aaPredicted RBP14.9□□□□□ -0.02
SPG7-210ENST00000564409 ABHD10Q9NUJ1 306 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 DDX56Q9NY93 547 aaKnown RBP14.9□□□□□ -0.02
SPG7-210ENST00000564409 TMEM98Q9Y2Y6 226 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 PCDHB11Q9Y5F2 797 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 HEY1Q9Y5J3 304 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 ST14Q9Y5Y6 855 aa14.9□□□□□ -0.02
SPG7-210ENST00000564409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.89□□□□□ -0.03
SPG7-210ENST00000564409 KCNK1O00180 336 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 APOL1O14791 398 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 C1QL1O75973 258 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 ASMTLO95671 621 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 MMP2P08253 660 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 HGFP14210 728 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 CD1CP29017 333 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 CD86P42081 329 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 NR2C2P49116 596 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 LIMK2P53671 638 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 PDPK2PQ6A1A2 396 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 PCSK4Q6UW60 755 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 CNGA4Q8IV77 575 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 SFRP1Q8N474 314 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPG7-210ENST00000564409 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
SPG7-210ENST00000564409 PTCD2Q8WV60 388 aaKnown RBP14.89□□□□□ -0.03
SPG7-210ENST00000564409 TTC9Q92623 222 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms