RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 GP5P40197 560 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 RAB28P51157 221 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 CSE1LP55060 971 aaKnown RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 ELLP55199 621 aaPredicted RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 SELENOVP59797 346 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 TMF1P82094 1093 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 HYAL4Q2M3T9 481 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 Q5PR19 223 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 MIS18BP1Q6P0N0 1132 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 METTL2BQ6P1Q9 378 aaKnown RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 PTF1AQ7RTS3 328 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 CACNA2D4Q7Z3S7 1137 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 LDB1Q86U70 411 aaPredicted RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 PI4KAP1Q8N8J0 262 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 KIF18AQ8NI77 898 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 PIGOQ8TEQ8 1089 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 METTL2AQ96IZ6 378 aaKnown RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 LINC00615Q96LM1 132 aaPredicted RBP2.6□□□□□ -1.99
CHD9-209ENST00000564255 RTN4RQ9BZR6 473 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 SPATC1LQ9H0A9 340 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 TASP1Q9H6P5 420 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 GRPEL1Q9HAV7 217 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 EPB41L5Q9HCM4 733 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 MMP25Q9NPA2 562 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 HAO2Q9NYQ3 351 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 ACSL5Q9ULC5 683 aa2.6□□□□□ -1.99
CHD9-209ENST00000564255 SMIM35A0A1B0GVV1 85 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 TMEM8BA6NDV4 472 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SPRY1O43609 319 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 MOSPD3O75425 235 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ATP5DP30049 168 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CCR10P46092 362 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 PTH2RP49190 550 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ID2Q02363 134 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CAMK2DQ13557 499 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CDC37Q16543 378 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 PNLIPRP3Q17RR3 467 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 TMEM119Q4V9L6 283 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CEP78Q5JTW2 689 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 GGNBP1Q5YKI7 109 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SIGIRRQ6IA17 410 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 LCN10Q6JVE6 187 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 PAPD4Q6PIY7 484 aaKnown RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 TRAT1Q6PIZ9 186 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ZNF793Q6ZN11 406 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ERN2Q76MJ5 926 aaKnown RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 SDCCAG8Q86SQ7 713 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 METTL23Q86XA0 190 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SNX32Q86XE0 403 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CEP57Q86XR8 500 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 MB21D2Q8IYB1 491 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 BOLLQ8N9W6 283 aaKnown RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 GPT2Q8TD30 523 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SLC35F5Q8WV83 523 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ERGIC1Q969X5 290 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 PTERQ96BW5 349 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 HDAC11Q96DB2 347 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 NUDCD1Q96RS6 583 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 CRAMP1Q96RY5 1269 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 DESI2Q9BSY9 194 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 HGH1Q9BTY7 390 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SLCO5A1Q9H2Y9 848 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 PIGMQ9H3S5 423 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ANKZF1Q9H8Y5 726 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 OR14J1Q9UGF5 321 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 IL17BQ9UHF5 180 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ANAPC5Q9UJX4 755 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ASTN2O75129 1339 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 CPED1A4D0V7 1026 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 E5RJQ4 531 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 RSL1D1O76021 490 aaKnown RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 SLCO2B1O94956 709 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 BCL10O95999 233 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ATP5BP06576 529 aaKnown RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 CERS1P27544 350 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 MC5RP33032 325 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 POLGP54098 1239 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 SRSF1Q07955 248 aaKnown RBP eCLIP2.59□□□□□ -1.99
CHD9-209ENST00000564255 NEDD9Q14511 834 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 INPP5JQ15735 1006 aaPredicted RBP2.59□□□□□ -1.99
CHD9-209ENST00000564255 MMEL1Q495T6 779 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ATP13A5Q4VNC0 1218 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SUSD1Q6UWL2 747 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 HAUS6Q7Z4H7 955 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 SIPA1Q96FS4 1042 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ZFYVE19Q96K21 471 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 ABHD6Q9BV23 337 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 NUP85Q9BW27 656 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 GPR108Q9NPR9 543 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 MSRB1Q9NZV6 116 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 TSPYL4Q9UJ04 414 aa2.59□□□□□ -1.99
CHD9-209ENST00000564255 A0A087WV48 116 aa2.59□□□□□ -2
CHD9-209ENST00000564255 A0A1W2PPC1 479 aa2.59□□□□□ -2
CHD9-209ENST00000564255 PPP6CO00743 305 aa2.59□□□□□ -2
CHD9-209ENST00000564255 TADA2AO75478 443 aa2.59□□□□□ -2
CHD9-209ENST00000564255 TGDSO95455 350 aa2.59□□□□□ -2
CHD9-209ENST00000564255 LINGO3P0C6S8 592 aa2.59□□□□□ -2
CHD9-209ENST00000564255 C6P13671 934 aa2.59□□□□□ -2
CHD9-209ENST00000564255 FASLGP48023 281 aa2.59□□□□□ -2
CHD9-209ENST00000564255 NPY4RP50391 375 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms