RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TIFABQ6ZNK6 161 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 Q6ZVL8 140 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 TAOK1Q7L7X3 1001 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SNX20Q7Z614 316 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SDCCAG8Q86SQ7 713 aaPredicted RBP10.12□□□□□ -0.79
SMG1-208ENST00000563448 UBALD2Q8IYN6 164 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SIX5Q8N196 739 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SHDQ96IW2 340 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 COQ10AQ96MF6 247 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 ASB2Q96Q27 587 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 GPR22Q99680 433 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 FOXQ1Q9C009 403 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 ASB8Q9H765 288 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 COQ6Q9Y2Z9 468 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 PLXND1Q9Y4D7 1925 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 TRBV5-4A0A0C4DH59 114 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 AGAP14A8MT82 685 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 CHURC1-FNTBB4DL54 471 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 GOLGA8RI6L899 631 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 TPP1O14773 563 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 AP1G1O43747 822 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 MMP20O60882 483 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 RNASEH2AO75792 299 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 MT-ND3P03897 115 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ALDOAP04075 364 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 GABRG2P18507 467 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 UGT1A6P19224 532 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 UGT1A1P22309 533 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 UGT1A4P22310 534 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 HPDP32754 393 aaPredicted RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 UGT1A3P35503 534 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 UGT1A5P35504 534 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 LRRC32Q14392 662 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 GAS6Q14393 721 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ACOX1Q15067 660 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 CRY1Q16526 586 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 TAS2R42Q7RTR8 314 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 C4orf33Q8N1A6 199 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SYNPOQ8N3V7 929 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 FLCNQ8NFG4 579 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ZNF398Q8TD17 642 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SCG3Q8WXD2 468 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 ISL2Q96A47 359 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 MRGPRX1Q96LB2 322 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 OMDQ99983 421 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ABCG8Q9H221 673 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 FAM83DQ9H4H8 585 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 CAB39LQ9H9S4 337 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 C2orf42Q9NWW7 574 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 FBXL12Q9NXK8 326 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 NFKBIL1Q9UBC1 381 aaPredicted RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 MUTYHQ9UIF7 546 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 MRPS17Q9Y2R5 130 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 CRYL1Q9Y2S2 319 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ANKRD12Q6UB98 2062 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 FAM95CA0A1B0GW59 222 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 TCRBV21S2A2A0A5A6 115 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 RGSL1A5PLK6 1076 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 FAM170BA6NMN3 283 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 PYGBP11216 843 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 C6P13671 934 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 BRAFP15056 766 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 KRT4P19013 534 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 NDUFV2P19404 249 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 NR1D1P20393 614 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ITGALP20701 1170 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 PMLP29590 882 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 MAGEA12P43365 314 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 DCDC1P59894 354 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 PPP2R2AP63151 447 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 PPARDQ03181 441 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SLC18A2Q05940 514 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 DNAJC3Q13217 504 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 NFATC2Q13469 925 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ATP13A5Q4VNC0 1218 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 RBM20Q5T481 1227 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 ZDHHC20Q5W0Z9 365 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 ZNF549Q6P9A3 640 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SERPINA9Q86WD7 417 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 RAVER1Q8IY67 606 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 LPGAT1Q92604 370 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SCAMP4Q969E2 229 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 CCDC97Q96F63 343 aaPredicted RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 TCF12Q99081 682 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 INTS10Q9NVR2 710 aaKnown RBP10.11□□□□□ -0.79
SMG1-208ENST00000563448 SENP1Q9P0U3 644 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 TMPRSS11EQ9UL52 423 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 SCML1Q9UN30 329 aa10.11□□□□□ -0.79
SMG1-208ENST00000563448 NEMP1O14524 444 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 WNT9AO14904 365 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 POLR3GO15318 223 aaPredicted RBP10.1□□□□□ -0.79
SMG1-208ENST00000563448 TSPAN6O43657 245 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 PLRG1O43660 514 aaKnown RBP10.1□□□□□ -0.79
SMG1-208ENST00000563448 SPAG7O75391 227 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 NDUFS3O75489 264 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 ACRV1P26436 265 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CCNFP41002 786 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 TTPAP49638 278 aa10.1□□□□□ -0.79
SMG1-208ENST00000563448 CSRP3P50461 194 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms