RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 KLHL32Q96NJ5 620 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 WRNIP1Q96S55 665 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SEMA3CQ99985 751 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF350Q9GZX5 532 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 P2RY12Q9H244 342 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GSTO2Q9H4Y5 243 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DCTPP1Q9H773 170 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 YY1AP1Q9H869 796 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GORASP2Q9H8Y8 452 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GOLGA2P5Q9HBQ8 144 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TRPV5Q9NQA5 729 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DDX4Q9NQI0 724 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ADARB2Q9NS39 739 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CENPMQ9NSP4 180 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 C20orf141Q9NUB4 165 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TCP11L1Q9NUJ3 509 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 RBM28Q9NW13 759 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CWC15Q9P013 229 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CNOT8Q9UFF9 292 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FBXO40Q9UH90 709 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CDC42EP3Q9UKI2 254 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TLK1Q9UKI8 766 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ADAMTS6Q9UKP5 1117 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FBXW2Q9UKT8 454 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 R3HDM2Q9Y2K5 976 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC27A6Q9Y2P4 619 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 PCDHB2Q9Y5E7 798 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ABCC12Q96J65 1359 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SCN7AQ01118 1682 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 A0A1B0GUL7 405 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 OOEPA6NGQ2 149 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 O00370 1275 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 RASGRF2O14827 1237 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 EIF3DO15371 548 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 PLRG1O43660 514 aaKnown RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 GMFGO60234 142 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 HS6ST1O60243 411 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ECE2O60344 883 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 MITFO75030 526 aaPredicted RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ERLIN1O75477 346 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 KAT7O95251 611 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 EFEMP2O95967 443 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 MT-ATP6P00846 226 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 SKILP12757 684 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ATP5JP18859 108 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ACHEP22303 614 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 GSTM5P46439 218 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 FASLGP48023 281 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 PRKAG1P54619 331 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 F2RL1P55085 397 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 SNU13P55769 128 aaKnown RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CDK18Q07002 472 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CFAP221Q4G0U5 840 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 RALGPS1Q5JS13 557 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM171A1Q5VUB5 890 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC9A4Q6AI14 798 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 HMBOX1Q6NT76 420 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 NHLRC1Q6VVB1 395 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 RBM43Q6ZSC3 357 aaKnown RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 SMIM5Q71RC9 77 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 TAF8Q7Z7C8 310 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 AMIGO3Q86WK7 504 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 PDPRQ8NCN5 879 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 OR7G3Q8NG95 312 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 PSMA8Q8TAA3 256 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF671Q8TAW3 534 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 GANCQ8TET4 914 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 LINC01599Q8WXQ3 324 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 NPIPB3Q92617 1050 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 C5orf30Q96GV9 206 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 PRR11Q96HE9 360 aaPredicted RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 HS6ST2Q96MM7 605 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 OR2A14Q96R47 310 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 TBCDQ9BTW9 1192 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 IFIH1Q9BYX4 1025 aaKnown RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 NUAK2Q9H093 628 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CLSTN2Q9H4D0 955 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 BCAS3Q9H6U6 928 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 WDR26Q9H7D7 661 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CXorf36Q9H7Y0 433 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 VCPKMTQ9H867 229 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CD209Q9NNX6 404 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 HPS4Q9NQG7 708 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 ECHDC1Q9NTX5 307 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM53CQ9NYF3 392 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 TRPC4Q9UBN4 977 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 LEF1Q9UJU2 399 aaPredicted RBP5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC8A2Q9UPR5 921 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 EP400Q96L91 3159 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 AOX1Q06278 1338 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 CASZ1Q86V15 1759 aa5.24□□□□□ -1.57
VPS35P1-201ENST00000563400 EDDM13A0A1B0GTR0 161 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ZC3H12DA2A288 527 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 XKRY2A2RUG3 117 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 WIPF3A6NGB9 483 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ZSCAN5BA6NJL1 495 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CXCL11O14625 94 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CTAGE5O15320 804 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GPRIN2O60269 458 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms