RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	ILF3	Q12906	894 aa	Known RBP eCLIP	21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	HENMT1	Q5T8I9	393 aa	Known RBP	21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	TRIM74	Q86UV6	250 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	RCOR2	Q8IZ40	523 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	PRR11	Q96HE9	360 aa	Predicted RBP	21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	ZNF578	Q96N58	590 aa	Predicted RBP	21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	SUDS3	Q9H7L9	328 aa	Predicted RBP	21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	GLOD4	Q9HC38	313 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	TAAR2	Q9P1P5	351 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	SATB2	Q9UPW6	733 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	TMEM98	Q9Y2Y6	226 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	RNF215	Q9Y6U7	377 aa		21.65	■■□□□ 1.06
PPP4C-205	ENST00000563200	RGSL1	A5PLK6	1076 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200		D6RAR5	112 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	NUDT21	O43809	227 aa	Known RBP	21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	RPLP0	P05388	317 aa	Known RBP	21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	AK4	P27144	223 aa	Predicted RBP	21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	ITPKB	P27987	946 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	CD68	P34810	354 aa	Predicted RBP	21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	PYCR3	Q53H96	274 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	KAZN	Q674X7	775 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	DOK6	Q6PKX4	331 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	RAD9B	Q6WBX8	426 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	SPATA22	Q8NHS9	363 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	KIAA1524	Q8TCG1	905 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	TFB1M	Q8WVM0	346 aa	Known RBP	21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	LRRN3	Q9H3W5	708 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	PCDHGA8	Q9Y5G5	932 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	DUSP10	Q9Y6W6	482 aa		21.64	■■□□□ 1.06
PPP4C-205	ENST00000563200	FADS2P1	A8MWK0	482 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	MT-CYB	P00156	380 aa	Predicted RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	ERVPABLB-1	P60509	514 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CDK18	Q07002	472 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	C3orf38	Q5JPI3	329 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	LYSMD3	Q7Z3D4	306 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	KDELC2	Q7Z4H8	507 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	SPRED1	Q7Z699	444 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	B3GNT8	Q7Z7M8	397 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	DAAM2	Q86T65	1068 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CCHCR1	Q8TD31	782 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	P3H4	Q92791	437 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	FAM83D	Q9H4H8	585 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	ZFYVE1	Q9HBF4	777 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	MAGEE1	Q9HCI5	957 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	LRIT1	Q9P2V4	623 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PLEKHM1	Q9Y4G2	1056 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	AHCTF1	Q8WYP5	2266 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PMS2P1	A4D2B8	440 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	BTNL10	A8MVZ5	291 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	INPP4B	O15327	924 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CTNNA1	P35221	906 aa	Known RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PPP2R5E	Q16537	467 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	SLC30A9	Q6PML9	568 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	ZNF438	Q7Z4V0	828 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PDZD3	Q86UT5	571 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CCNJL	Q8IV13	435 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	ZDHHC1	Q8WTX9	485 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	LIN37	Q96GY3	246 aa	Predicted RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CRELD1	Q96HD1	420 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	RBM41	Q96IZ5	413 aa	Known RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	CALR3	Q96L12	384 aa	Known RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	SLC46A1	Q96NT5	459 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	GFM1	Q96RP9	751 aa	Known RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PKD2L2	Q9NZM6	624 aa		21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	OAS3	Q9Y6K5	1087 aa	Known RBP	21.63	■■□□□ 1.05
PPP4C-205	ENST00000563200	ATRX	P46100	2492 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	SCN8A	Q9UQD0	1980 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	DNAJC6	O75061	913 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	ABCG1	P45844	678 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	MAZ	P56270	477 aa	Known RBP	21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	B4GALNT1	Q00973	533 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	PCSK7	Q16549	785 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	BBS12	Q6ZW61	710 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	TMC3	Q7Z5M5	1100 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	NAGS	Q8N159	534 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200		Q8N9G6	341 aa	Predicted RBP	21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	OR2M4	Q96R27	311 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	LACRT	Q9GZZ8	138 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	CDH19	Q9H159	772 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	SYNDIG1	Q9H7V2	258 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	VPS18	Q9P253	973 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	PCDHA3	Q9Y5H8	950 aa		21.62	■■□□□ 1.05
PPP4C-205	ENST00000563200	RRP8	O43159	456 aa	Known RBP	21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	MTSS1	O43312	755 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	ECEL1	O95672	775 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	NDST3	O95803	873 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	ATP1A1	P05023	1023 aa	Known RBP	21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	PIRT	P0C851	137 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	CCKBR	P32239	447 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	NR1D2	Q14995	579 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	MARK2	Q7KZI7	788 aa	Known RBP	21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	ZC3H18	Q86VM9	953 aa	Known RBP	21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	TMEM139	Q8IV31	216 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	CCDC50	Q8IVM0	306 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	ARL14	Q8N4G2	192 aa		21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	WDR36	Q8NI36	951 aa	Known RBP	21.61	■■□□□ 1.05
PPP4C-205	ENST00000563200	PATE1	Q8WXA2	126 aa		21.61	■■□□□ 1.05

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms