RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 FBXO25Q8TCJ0 367 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 LRRC39Q96DD0 335 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 STAMBPL1Q96FJ0 436 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 BMFQ96LC9 184 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 NAT9Q9BTE0 207 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 FOXP3Q9BZS1 431 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 IL26Q9NPH9 171 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 CHRAC1Q9NRG0 131 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 MTRF1LQ9UGC7 380 aaKnown RBP18.72■□□□□ 0.59
RAB40C-207ENST00000563109 SLC30A1Q9Y6M5 507 aa18.72■□□□□ 0.59
RAB40C-207ENST00000563109 FAM237BA0A1B0GVD1 139 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 A0A1W2PR77 199 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 PROB1E7EW31 1015 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 K7ESM1 405 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 VILLO15195 856 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 TP73O15350 636 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 HTR1BP28222 390 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 MC4RP32245 332 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 CSNK1EP49674 416 aaKnown RBP18.71■□□□□ 0.59
RAB40C-207ENST00000563109 CUL1Q13616 776 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 PTK2BQ14289 1009 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 TRIM61Q5EBN2 209 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 AFTPHQ6ULP2 937 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 LAYNQ6UX15 382 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 ZDHHC24Q6UX98 284 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 CEP128Q6ZU80 1094 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 DTX3LQ8TDB6 740 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 IFT81Q8WYA0 676 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 SIGLEC10Q96LC7 697 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 APOOQ9BUR5 198 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 OR1A2Q9Y585 309 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 CACNA1HO95180 2353 aa18.71■□□□□ 0.59
RAB40C-207ENST00000563109 BHMG1C9JSJ3 638 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 H7C0S8 307 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 TLR4O00206 839 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 CCL22O00626 93 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 INPP4BO15327 924 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 EIF3HO15372 352 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 SRP72O76094 671 aaKnown RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 MYCLP1P12525 358 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PGAM1P18669 254 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 KELP23276 732 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PSMA3P25788 255 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 NMBRP28336 390 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 KIAA1024LP59773 190 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 CDK3Q00526 305 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 ACVR1Q04771 509 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PDIA2Q13087 525 aaKnown RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PDE1CQ14123 709 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 NFATC4Q14934 902 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 TRADDQ15628 312 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 CHRNA6Q15825 494 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PHYKPLQ8IUZ5 450 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 CCNJLQ8IV13 435 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PELI3Q8N2H9 469 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 OR13J1Q8NGT2 312 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■■■■■ 54.9
RAB40C-207ENST00000563109 ZNF669Q96BR6 464 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 CDKN2AIPNLQ96HQ2 116 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 HIC2Q96JB3 615 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PWWP2AQ96N64 755 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 EBNA1BP2Q99848 306 aaKnown RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 NUSAP1Q9BXS6 441 aaKnown RBP18.7■□□□□ 0.58
RAB40C-207ENST00000563109 TEX101Q9BY14 249 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 PHACTR1Q9C0D0 580 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 SLC2A6Q9UGQ3 507 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 SLC6A14Q9UN76 642 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 MUC6Q6W4X9 2439 aa18.7■□□□□ 0.58
RAB40C-207ENST00000563109 RALGAPA1Q6GYQ0 2036 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 A0A1B0GVT2 93 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 FADS2P1A8MWK0 482 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 KHNYNO15037 678 aaKnown RBP18.69■□□□□ 0.58
RAB40C-207ENST00000563109 BANF1O75531 89 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 TTC4O95801 387 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 SOD1P00441 154 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 WNT1P04628 370 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 POLBP06746 335 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 HOXC4P09017 264 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-207ENST00000563109 TRIM23P36406 574 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 CCDC6Q16204 474 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 MSS51Q4VC12 460 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 ZRANB3Q5FWF4 1079 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 SLC23A3Q6PIS1 610 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 KDM7AQ6ZMT4 941 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 MACC1Q6ZN28 852 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 SNX20Q7Z614 316 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 CCDC25Q86WR0 208 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 OR6P1Q8NGX9 317 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 ZNF398Q8TD17 642 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 GLYATL1Q969I3 302 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 HDAC10Q969S8 669 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 FUBP1Q96AE4 644 aaKnown RBP18.69■□□□□ 0.58
RAB40C-207ENST00000563109 ULK4Q96C45 1275 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 TBATAQ96M53 351 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 ZNF778Q96MU6 729 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 VPS35Q96QK1 796 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 ASB8Q9H765 288 aa18.69■□□□□ 0.58
RAB40C-207ENST00000563109 SAYSD1Q9NPB0 183 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms