RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 RPL7AP62424 266 aaKnown RBP3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 COL28A1Q2UY09 1125 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 EIF2S3LQ2VIR3 472 aaKnown RBP3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 PAPPA-AS1Q5QFB9 102 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 JAKMIP3Q5VZ66 844 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 CCDC70Q6NSX1 233 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 CDC73Q6P1J9 531 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 QSOX2Q6ZRP7 698 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 SFR1Q86XK3 245 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 WDR63Q8IWG1 891 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 KLHDC8BQ8IXV7 354 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 SPATA6LQ8N4H0 392 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 PCYOX1LQ8NBM8 494 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 GTF3C6Q969F1 213 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 SMARCE1Q969G3 411 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 FAM149B1Q96BN6 582 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 TMEM19Q96HH6 336 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 TMEM47Q9BQJ4 181 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 SLC26A6Q9BXS9 759 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 PPP1R3EQ9H7J1 279 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 PCDH9Q9HC56 1237 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 MCM9Q9NXL9 1143 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 C1RLQ9NZP8 487 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 TINAGQ9UJW2 476 aa3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 INTS6Q9UL03 887 aaKnown RBP3.09□□□□□ -1.91
HDGFL3-202ENST00000562702 FANCD2Q9BXW9 1451 aa3.09□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF608Q9ULD9 1512 aaPredicted RBP3.09□□□□□ -1.92
HDGFL3-202ENST00000562702 IGHV4OR15-8A0A075B7B6 117 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 A0A1W2PPH5 198 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 A0A1W2PRG0 241 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 HNRNPCL2B2RXH8 293 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 SNAP23O00161 211 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 TULP2O00295 520 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 FGF17O60258 216 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 BAG4O95429 457 aaKnown RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 UBL4AP11441 157 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 BDKRB2P30411 391 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 PIP4K2AP48426 406 aaPredicted RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 HSD17B4P51659 736 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 NLRP5P59047 1200 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF155Q12901 538 aaPredicted RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 TBX2Q13207 712 aaPredicted RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 OLIG2Q13516 323 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 CCNG2Q16589 344 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 C2orf68Q2NKX9 166 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 ALG11Q2TAA5 492 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 DPCR1Q3MIW9 517 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 BSPRYQ5W0U4 402 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 SIGIRRQ6IA17 410 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 RGMBQ6NW40 437 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 PQLC2Q6ZP29 291 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 TUBA1AQ71U36 451 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 R3HCC1LQ7Z5L2 792 aaKnown RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 CNTROBQ8N137 903 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 ETNPPLQ8TBG4 499 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 PSPC1Q8WXF1 523 aaKnown RBP3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 RFFLQ8WZ73 363 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 FIG4Q92562 907 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 HARBI1Q96MB7 349 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 PIP5K1AQ99755 562 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 TUBA1CQ9BQE3 449 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 BARHL1Q9BZE3 327 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 UBTD1Q9HAC8 227 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 EBF2Q9HAK2 575 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 KIF9Q9HAQ2 790 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 AMDHD2Q9Y303 409 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 ADAM18Q9Y3Q7 739 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 CEPT1Q9Y6K0 416 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 CAPN7Q9Y6W3 813 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 CEP164Q9UPV0 1460 aa3.08□□□□□ -1.92
HDGFL3-202ENST00000562702 A0A0G2JPF8 293 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 NPIPB15A6NHN6 443 aaPredicted RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HNRNPCL3B7ZW38 293 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 IFNL4K9M1U5 179 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 MID1O15344 667 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HNRNPCL1O60812 293 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM63AO94886 807 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 RTN3O95197 1032 aaPredicted RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 FTCDO95954 541 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 ATP1A1P05023 1023 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HNRNPCL4P0DMR1 293 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HSPA1AP0DMV8 641 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HSPA1BP0DMV9 641 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 ATP1A3P13637 1013 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF182P17025 639 aaPredicted RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 MCM3P25205 808 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 BSGP35613 385 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 USP8P40818 1118 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 CCR9P51686 369 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HNRNPH2P55795 449 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 CSNK2A1P68400 391 aaPredicted RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 OLR1P78380 273 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 GOLGA8DPQ0D2H9 430 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 G3BP1Q13283 466 aaKnown RBP eCLIP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 DCTN2Q13561 401 aaKnown RBP3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 HIST2H2BDQ6DRA6 164 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 TSSK4Q6SA08 328 aa3.07□□□□□ -1.92
HDGFL3-202ENST00000562702 CACNA2D4Q7Z3S7 1137 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms