RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 POLD2P49005 469 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 CDKN1CP49918 316 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 XIAPP98170 497 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 CDK3Q00526 305 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 IL9RQ01113 521 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 SLC7A5Q01650 507 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 DPTQ07507 201 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 CDH17Q12864 832 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 PEX6Q13608 980 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 PDE1CQ14123 709 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 SEPT6Q14141 434 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 DHX34Q14147 1143 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 TCEA2Q15560 299 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 TAF1AQ15573 450 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 SMAD1Q15797 465 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 CHRNA6Q15825 494 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 HLA-BQ31612 363 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FNBP1LQ5T0N5 605 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 RAET1GQ6H3X3 334 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 LRRC8BQ6P9F7 803 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 CES3Q6UWW8 571 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FAM151BQ6UXP7 276 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 C4orf22Q6V702 233 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 ZNF765Q7L2R6 523 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 HEATR4Q86WZ0 1026 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 KIAA2013Q8IYS2 634 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 RBFAQ8N0V3 343 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 OR13J1Q8NGT2 312 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 BRSK1Q8TDC3 778 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 KLHDC7BQ96G42 594 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 SERPINB12Q96P63 405 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 PPP1R2P1Q96PQ5 205 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 CARD6Q9BX69 1037 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FAM83DQ9H4H8 585 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FAM96AQ9H5X1 160 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FGF22Q9HCT0 170 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 IL26Q9NPH9 171 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 MRPL40Q9NQ50 206 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 GOLGA6AQ9NYA3 693 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 GRHL1Q9NZI5 618 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 PKD2L2Q9NZM6 624 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 HACD3Q9P035 362 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 NFKBIL1Q9UBC1 381 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 SUSD2Q9UGT4 822 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 TPX2Q9ULW0 747 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 DCHS1Q96JQ0 3298 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 ESYT3A0FGR9 886 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 PRR5-ARHGAP8B1AHC4 643 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A9O60656 530 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 LRP3O75074 770 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 SEC31AO94979 1220 aaKnown RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 TUBB4AP04350 444 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 F7P08709 466 aaPredicted RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 TSHRP16473 764 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A6P19224 532 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A1P22309 533 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A4P22310 534 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 PSMA3P25788 255 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 NFKBIAP25963 317 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 NMBRP28336 390 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A3P35503 534 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A5P35504 534 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 GPR1P46091 355 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 ITGA8P53708 1063 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 DCDC1P59894 354 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 CKAP4Q07065 602 aaKnown RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 BNIP3Q12983 259 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 NFATC4Q14934 902 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 ALG11Q2TAA5 492 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 ATP13A5Q4VNC0 1218 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 DUPD1Q68J44 220 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 HIBCHQ6NVY1 386 aaPredicted RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 ZDHHC24Q6UX98 284 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 KANSL1Q7Z3B3 1105 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 LINC00523Q86TU6 105 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 IGDCC3Q8IVU1 814 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 NRSN1Q8IZ57 195 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 MINDY1Q8N5J2 469 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 DNAAF3Q8N9W5 541 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 CEP76Q8TAP6 659 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 CCHCR1Q8TD31 782 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 OR1E3Q8WZA6 343 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 PDXPQ96GD0 296 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 COX14Q96I36 57 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 SIGLEC10Q96LC7 697 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 RANBP9Q96S59 729 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 EDEM2Q9BV94 578 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 GTPBP2Q9BX10 602 aaKnown RBP9.73□□□□□ -0.85
CLK3-208ENST00000562626 TEX101Q9BY14 249 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 TRABDQ9H4I3 376 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A7Q9HAW7 530 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A10Q9HAW8 530 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 UGT1A8Q9HAW9 530 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 CHRAC1Q9NRG0 131 aa9.73□□□□□ -0.85
CLK3-208ENST00000562626 DMGDHQ9UI17 866 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms