RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 EML3Q32P44 896 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 AGKQ53H12 422 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TJAP1Q5JTD0 557 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 UBXN11Q5T124 520 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 IRAK1BP1Q5VVH5 260 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ALKAL1Q6UXT8 129 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 NDNFQ8TB73 568 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ZNF560Q96MR9 790 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 LRRC40Q9H9A6 602 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 WDR6Q9NNW5 1121 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 WDR70Q9NW82 654 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ASNSD1Q9NWL6 643 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 OXSMQ9NWU1 459 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ADPRHL2Q9NX46 363 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TMEM181Q9P2C4 612 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 EGFL7Q9UHF1 273 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 IPPQ9Y573 584 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 SRP72O76094 671 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 ERVK-10P10266 1014 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 AXLP30530 894 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 OXTRP30559 389 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 NAGLUP54802 743 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ADARB1P78563 741 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 INPP5AQ14642 412 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 TRIM71Q2Q1W2 868 aaKnown RBP14□□□□□ -0.17
GTF3C1-203ENST00000562609 GNASQ5JWF2 1037 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 DESI1Q6ICB0 168 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 AGMOQ6ZNB7 445 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 CYS1Q717R9 158 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 LYSMD2Q8IV50 215 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 NETO2Q8NC67 525 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 KHSRPQ92945 711 aaKnown RBP eCLIP14□□□□□ -0.17
GTF3C1-203ENST00000562609 BTN2A3PQ96KV6 586 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 MIR1-1HGQ9H1L0 117 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 CAB39LQ9H9S4 337 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 NMRAL1Q9HBL8 299 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 FKBP14Q9NWM8 211 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 VTI1BQ9UEU0 232 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 ZNF221Q9UK13 617 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 SARDHQ9UL12 918 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
GTF3C1-203ENST00000562609 C17orf102A2RUQ5 167 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 MRASO14807 208 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 PRPSAP2O60256 369 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 H2AFYO75367 372 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 ARSAP15289 507 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SHMT2P34897 504 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CPT1AP50416 773 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 PPP5CP53041 499 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 FPGSQ05932 587 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 TFDP2Q14188 446 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 NFE2Q16621 373 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 DGUOKQ16854 277 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 GEN1Q17RS7 908 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 C17orf99Q6UX52 265 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 LINC00299Q6ZSB3 139 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 HACE1Q8IYU2 909 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 HMGCLL1Q8TB92 370 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC2A14Q8TDB8 520 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC35F5Q8WV83 523 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 WNT8BQ93098 351 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC45A3Q96JT2 553 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 DEPDC7Q96QD5 511 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 TMEM246Q9BRR3 403 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CNPY3Q9BT09 278 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 B3GNT4Q9C0J1 378 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 MAU2Q9Y6X3 613 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 LAMA3Q16787 3333 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 A0A096LPK6 155 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CLDN5O00501 218 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 ALBP02768 609 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 NTRK1P04629 796 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 LRPAP1P30533 357 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 GARSP41250 739 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 ABCG1P45844 678 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SERPINB10P48595 397 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CLCNKBP51801 687 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SESN2P58004 480 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 BST2Q10589 180 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CRHR2Q13324 411 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 FASTKQ14296 549 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 NPTX1Q15818 432 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 BSPRYQ5W0U4 402 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 LYPD8Q6UX82 237 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 NT5DC4Q86YG4 428 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 GATAD2AQ86YP4 633 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SMG8Q8ND04 991 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 TRPV1Q8NER1 839 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 GLMNQ92990 594 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 LPPQ93052 612 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 RTP4Q96DX8 246 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SNX18Q96RF0 628 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 ALOXE3Q9BYJ1 711 aa13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 CAB39Q9Y376 341 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 TIMM13Q9Y5L4 95 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-203ENST00000562609 SYNJ2BP-COX16A0A087WUM0 186 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 SEC24AO95486 1093 aa13.98□□□□□ -0.17
GTF3C1-203ENST00000562609 IL7RP16871 459 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms