RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 ANXA6P08133 673 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CKMT1AP12532 417 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CTSEP14091 401 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 GEMP55040 296 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 ELOCQ15369 112 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 SLC1A5Q15758 541 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 ALS2CLQ60I27 953 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CCDC70Q6NSX1 233 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 ZCCHC8Q6NZY4 707 aaKnown RBP15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 TMC3Q7Z5M5 1100 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 NLRP8Q86W28 1048 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 RAVER1Q8IY67 606 aaKnown RBP15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 FAM71DQ8N9W8 422 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 GPR26Q8NDV2 337 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 TMEM121Q9BTD3 319 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 FICDQ9BVA6 458 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 GPR63Q9BZJ6 419 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 TMEM168Q9H0V1 697 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 FAM83DQ9H4H8 585 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CARS2Q9HA77 564 aaKnown RBP15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 CNOT6Q9ULM6 557 aaKnown RBP15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 TMEM98Q9Y2Y6 226 aa15.3■□□□□ 0.04
CCNDBP1-203ENST00000562553 C5orf60A6NFR6 353 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 ANXA9O76027 345 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 EPOP01588 193 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 BPIP17213 487 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 ADRA1AP35348 466 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 C6orf132Q5T0Z8 1188 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 TMPRSS7Q7RTY8 843 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 SLC35F3Q8IY50 421 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 TTC30BQ8N4P2 665 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 COX14Q96I36 57 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 APOL2Q9BQE5 337 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 BOCQ9BWV1 1114 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 FSD1LQ9BXM9 530 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 CARD9Q9H257 536 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 BPIFA1Q9NP55 256 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 SIRPGQ9P1W8 387 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 DOLKQ9UPQ8 538 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 SLC17A4Q9Y2C5 497 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 OAS3Q9Y6K5 1087 aaKnown RBP15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 FAM208BQ5VWN6 2430 aa15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 ZNF106Q9H2Y7 1883 aaKnown RBP15.29■□□□□ 0.04
CCNDBP1-203ENST00000562553 FREM2Q5SZK8 3169 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 RGSL1A5PLK6 1076 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 SRRM3A6NNA2 597 aaPredicted RBP15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 LIASO43766 372 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 CAPNS1P04632 268 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 FGF1P05230 155 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 PYGLP06737 847 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 IVLP07476 585 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 HLA-DPA1P20036 260 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 GNPDA1P46926 289 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 DCDC1P59894 354 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 SIX1Q15475 284 aaPredicted RBP15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 GUSBP11Q6P575 273 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 GKN2Q86XP6 184 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 SFTPA2Q8IWL1 248 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 KYQ8NBH2 561 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 BLOC1S5Q8TDH9 187 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 C1orf54Q8WWF1 131 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 SPATA16Q9BXB7 569 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 PCYT1BQ9Y5K3 369 aaPredicted RBP15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 ST14Q9Y5Y6 855 aa15.28■□□□□ 0.04
CCNDBP1-203ENST00000562553 DSPP15924 2871 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 CPED1A4D0V7 1026 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 BUD23O43709 281 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 USP12O75317 370 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 METTL18O95568 372 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 TNNT3P45378 269 aaPredicted RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 ILKQ13418 452 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 SPARCL1Q14515 664 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 PRPSAP1Q14558 356 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 NR0B2Q15466 257 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 OASLQ15646 514 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 RANBP10Q6VN20 620 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 ARHGEF18Q6ZSZ5 1173 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 TAF8Q7Z7C8 310 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 NRROSQ86YC3 692 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 KLHDC8BQ8IXV7 354 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 TAB3Q8N5C8 712 aaPredicted RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 ZCCHC14Q8WYQ9 949 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 SCARF2Q96GP6 870 aaPredicted RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.04
CCNDBP1-203ENST00000562553 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms