RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FBXO48Q5FWF7 155 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 DCDC5Q6ZRR9 648 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 ZC3H7AQ8IWR0 971 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 RNF145Q96MT1 663 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 TMEM74Q96NL1 305 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 KATNBL1Q9H079 304 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 ING2Q9H160 280 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 PFDN4Q9NQP4 134 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 SELENONQ9NZV5 590 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 NUDT5Q9UKK9 219 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 KCTD3Q9Y597 815 aa13.93□□□□□ -0.18
VPS9D1-202ENST00000561976 KANSL1LA0AUZ9 987 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 IRAK2O43187 625 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 DYNC1LI2O43237 492 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 ELK4P28324 431 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 HLCSP50747 726 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 BMXP51813 675 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 RAB15P59190 212 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 ECT2LQ008S8 904 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 TNK2Q07912 1038 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 FOXM1Q08050 763 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 NFATC3Q12968 1075 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 MOGQ16653 247 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 AASDHQ4L235 1098 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 NANOGP8Q6NSW7 305 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 CENPSQ8N2Z9 138 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 KLHL5Q96PQ7 755 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 SEMA4BQ9NPR2 832 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 KCNH4Q9UQ05 1017 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 LTBP3Q9NS15 1303 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 A0A1W2PP18 115 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 B4GAT1O43505 415 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 MATN1P21941 496 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 NR1D2Q14995 579 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 OR4D1Q15615 310 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 FAM117BQ6P1L5 589 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 OSCP1Q8WVF1 389 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 SLC30A3Q99726 388 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 YTHDF1Q9BYJ9 559 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 ARNT2Q9HBZ2 717 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 POLR3BQ9NW08 1133 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 TMEM9Q9P0T7 183 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 TIMM22Q9Y584 194 aa13.92□□□□□ -0.18
VPS9D1-202ENST00000561976 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TCRBV5S2A0A599 114 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 FUOMA2VDF0 154 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 SUPT3HB4E1H0 165 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 K7EPI3 171 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 BCL10O95999 233 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 SLC2A3P11169 496 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 PCSK1P29120 753 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 DSC2Q02487 901 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 RELAQ04206 551 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 PAGE3Q5JUK9 113 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TBPL2Q6SJ96 375 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 ACDQ96AP0 544 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TBATAQ96M53 351 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 BDH2Q9BUT1 245 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 CHID1Q9BWS9 393 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 MUC13Q9H3R2 512 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 USP22Q9UPT9 525 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 OAS3Q9Y6K5 1087 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 ZFC3H1O60293 1989 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 C1orf232A0A0U1RR37 186 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 CCDC154A6NI56 674 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 E9PAM4 449 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TREHO43280 583 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 UMPSP11172 480 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 EEF1DP29692 281 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 RENBPP51606 427 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 AFF1P51825 1210 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 GNA12Q03113 381 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TMEM214Q6NUQ4 689 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TFAP2DQ7Z6R9 452 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 C14orf80Q86SX3 495 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 GPC2Q8N158 579 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 BPIFB6Q8NFQ5 453 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TANKQ92844 425 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 BIRC7Q96CA5 298 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 IMP4Q96G21 291 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TEX37Q96LM6 180 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 GAD1Q99259 594 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 CCDC68Q9H2F9 335 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
VPS9D1-202ENST00000561976 CASTOR2A6NHX0 329 aa13.9□□□□□ -0.18
VPS9D1-202ENST00000561976 PAPSS2O95340 614 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms