RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TRIM24O15164 1050 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 LDB2O43679 373 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 GJB3O75712 270 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 RPLP2P05387 115 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 FGFR3P22607 806 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PSMD8P48556 350 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 BCAP31P51572 246 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 KPNA1P52294 538 aaPredicted RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 HERVK_113P63132 956 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 RHDQ02161 417 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 MGAT5BQ3V5L5 792 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SAMD4BQ5PRF9 694 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 RAB44Q7Z6P3 723 aaPredicted RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ZNF280BQ86YH2 543 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ZNF683Q8IZ20 524 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PGBD5Q8N414 524 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ARRDC2Q8TBH0 407 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 TOP1MTQ969P6 601 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 L3HYPDHQ96EM0 354 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 NEURL2Q9BR09 285 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ERVK-6Q9BXR3 956 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 KIAA1522Q9P206 1035 aaPredicted RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 EBF1Q9UH73 591 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ZNHIT2Q9UHR6 403 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ARL5AQ9Y689 179 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SCN10AQ9Y5Y9 1956 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 TDRD15B5MCY1 1934 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 B4GALT3O60512 393 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 GOT2P00505 430 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 C8BP07358 591 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ATXN1LP0C7T5 689 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PIRTP0C851 137 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SLC26A3P40879 764 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 OR1G1P47890 313 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SLC7A2P52569 658 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ZNF235Q14590 738 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 NFE2Q16621 373 aaPredicted RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 MRNIPQ6NTE8 343 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 GLB1LQ6UWU2 654 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CLYBLQ8N0X4 340 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PPWD1Q96BP3 646 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 BTN2A3PQ96KV6 586 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 C3orf30Q96M34 536 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CAAP1Q9H8G2 361 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SARDHQ9UL12 918 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 MIA3Q5JRA6 1907 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CEP350Q5VT06 3117 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 NR5A2O00482 541 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CD3EAPO15446 510 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 SIX3O95343 332 aaPredicted RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 ASGR1P07306 291 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PSMC3P17980 439 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CDH15P55291 814 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 GALNT3Q14435 633 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PITRM1Q5JRX3 1037 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 C10orf120Q5SQS8 335 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 CYHR1Q6ZMK1 362 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 DCDC5Q6ZRR9 648 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 HERC6Q8IVU3 1022 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 DDIASQ8IXT1 998 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 TEX26Q8N6G2 289 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 FATE1Q969F0 183 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 FBXO32Q969P5 355 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 GPATCH1Q9BRR8 931 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 EFHD1Q9BUP0 239 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 POLR1EQ9GZS1 481 aaKnown RBP10.94□□□□□ -0.66
NEIL1-202ENST00000561643 COQ10BQ9H8M1 238 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 IL1RL2Q9HB29 575 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 MID1IP1Q9NPA3 183 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 TIMM22Q9Y584 194 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 PTPRDP23468 1912 aa10.94□□□□□ -0.66
NEIL1-202ENST00000561643 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 UBXN8O00124 270 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
NEIL1-202ENST00000561643 CYBAP13498 195 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 GFAPP14136 432 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 CD1DP15813 335 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 FDXRP22570 491 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 OR1E1P30953 314 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 ACVRL1P37023 503 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 ARPP19P56211 112 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 SH3BP2P78314 561 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 TRAP1Q12931 704 aaKnown RBP10.93□□□□□ -0.66
NEIL1-202ENST00000561643 PFKFB4Q16877 469 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 MFSD14CQ5VZR4 134 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 CLVS1Q8IUQ0 354 aaPredicted RBP10.93□□□□□ -0.66
NEIL1-202ENST00000561643 CENPSQ8N2Z9 138 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 PCYOX1LQ8NBM8 494 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 OR13C4Q8NGS5 318 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 UPF3AQ9H1J1 476 aaKnown RBP10.93□□□□□ -0.66
NEIL1-202ENST00000561643 MARCH2Q9P0N8 246 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 FBXO9Q9UK97 447 aaPredicted RBP10.93□□□□□ -0.66
NEIL1-202ENST00000561643 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 MYO16Q9Y6X6 1858 aa10.93□□□□□ -0.66
NEIL1-202ENST00000561643 LOC285095A0A1B0GVY8 99 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms