RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 DOK6Q6PKX4 331 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 WDR74Q6RFH5 385 aaPredicted RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 ZNF765Q7L2R6 523 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 POLNQ7Z5Q5 900 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 FAM129CQ86XR2 697 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 PTRH1Q86Y79 214 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 NLGN4XQ8N0W4 816 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 SFRP1Q8N474 314 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 NLGN4YQ8NFZ3 816 aaPredicted RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 SLC37A2Q8TED4 501 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 AHCYL2Q96HN2 611 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 COX14Q96I36 57 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 ZPBPQ9BS86 351 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 EFHD1Q9BUP0 239 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 HSD3B7Q9H2F3 369 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 MRPL47Q9HD33 250 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 FBXO8Q9NRD0 319 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 ETNK2Q9NVF9 386 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 CNOT8Q9UFF9 292 aaKnown RBP11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 SCINQ9Y6U3 715 aa11.76□□□□□ -0.53
CARMIL3-204ENST00000561354 PDHA1P08559 390 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CTPS1P17812 591 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 IL1R2P27930 398 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 SERPINB6P35237 376 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CASRP41180 1078 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 PTSQ03393 145 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 NCAPHQ15003 741 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CRTC2Q53ET0 693 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CEACAM20Q6UY09 585 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 RFLNAQ6ZTI6 216 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 GALNT13Q8IUC8 556 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 LRRC49Q8IUZ0 686 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 NRSN1Q8IZ57 195 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 ATPAF2Q8N5M1 289 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 TEX26Q8N6G2 289 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 EXD1Q8NHP7 514 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 SCAMP4Q969E2 229 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 KIAA1143Q96AT1 154 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 SH3KBP1Q96B97 665 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CSPG4P5Q96PW8 444 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 EPN3Q9H201 632 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 HAUS4Q9H6D7 363 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 GPN2Q9H9Y4 310 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 VPS18Q9P253 973 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 CD84Q9UIB8 345 aa11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 TMEM184BQ9Y519 407 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-204ENST00000561354 TRBV23OR9-2A0A075B6M9 112 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 A0A0J9YYE9 177 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 A0A0U1RQS6 177 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 LRRC53A6NM62 1247 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 NKX2-8O15522 239 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 EML2O95834 649 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 TRBC1P01850 177 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 MYBL1P10243 752 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 RARAP10276 462 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 PRKCIP41743 596 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 STC1P52823 247 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 EPHA4P54764 986 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 FOXK1P85037 733 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 HHEXQ03014 270 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ABHD18Q0P651 414 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 UBAP2LQ14157 1087 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 SKIDA1Q1XH10 827 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 MARK2Q7KZI7 788 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ZNF571Q7Z3V5 609 aaPredicted RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 TRIM74Q86UV6 250 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ZNF761Q86XN6 746 aaPredicted RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 C9orf43Q8TAL5 461 aaPredicted RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 TRIM11Q96F44 468 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 AGAP2Q99490 1192 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 POLR1EQ9GZS1 481 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ZMYND15Q9H091 742 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 TRIT1Q9H3H1 467 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 AIPL1Q9NZN9 384 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 ANKMY1Q9P2S6 941 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 DNPEPQ9ULA0 475 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 UBR5O95071 2799 aaPredicted RBP11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 BOD1L1Q8NFC6 3051 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 PTPN13Q12923 2485 aa11.74□□□□□ -0.53
CARMIL3-204ENST00000561354 LOC101059948A0A1B0GTJ6 334 aa11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 CLEC18AA5D8T8 446 aa11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 A6NCN8 305 aa11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 A8MU76 341 aa11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 DDX3XO00571 662 aaKnown RBP eCLIP11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 ZFC3H1O60293 1989 aaKnown RBP11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 DNAJC6O75061 913 aa11.73□□□□□ -0.53
CARMIL3-204ENST00000561354 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms