RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 HIC2Q96JB3 615 aa19.81■□□□□ 0.76
TSPAN3-210ENST00000561277 APOLD1Q96LR9 279 aa19.81■□□□□ 0.76
TSPAN3-210ENST00000561277 FRMD8Q9BZ67 464 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-210ENST00000561277 CARS2Q9HA77 564 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-210ENST00000561277 TMEM98Q9Y2Y6 226 aa19.81■□□□□ 0.76
TSPAN3-210ENST00000561277 BUD23O43709 281 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 BPIP17213 487 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 SIX1Q15475 284 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 LONRF2Q1L5Z9 754 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 PARP6Q2NL67 630 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 MARK2Q7KZI7 788 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 ADAMTS14Q8WXS8 1223 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 SCNM1Q9BWG6 230 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 TMEM168Q9H0V1 697 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 TRABDQ9H4I3 376 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 HACD3Q9P035 362 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 SUFUQ9UMX1 484 aa19.8■□□□□ 0.76
TSPAN3-210ENST00000561277 USP27XA6NNY8 438 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 TPP1O14773 563 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 KIF5CO60282 957 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 RFPL3O75679 317 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 ASMTLO95671 621 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 FUCA1P04066 466 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 ATP1A1P05023 1023 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 ADRA1AP35348 466 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 GNPDA1P46926 289 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 DCDC1P59894 354 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 P3H1Q32P28 736 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 DHRS13Q6UX07 377 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 RAB44Q7Z6P3 723 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 TTC30BQ8N4P2 665 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 RTP4Q96DX8 246 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 TBL1YQ9BQ87 522 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 RAD18Q9NS91 495 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 SLC17A4Q9Y2C5 497 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 SCN8AQ9UQD0 1980 aa19.79■□□□□ 0.76
TSPAN3-210ENST00000561277 STIP1P31948 543 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 HMGCLP35914 325 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 C6orf132Q5T0Z8 1188 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 RANBP10Q6VN20 620 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 TAF8Q7Z7C8 310 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 PRUNE1Q86TP1 453 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 GKN2Q86XP6 184 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 FAM181AQ8N9Y4 354 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CCL4L1Q8NHW4 92 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 MAIP1Q8WWC4 291 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 COX14Q96I36 57 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 ZSCAN5AQ9BUG6 496 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CDH19Q9H159 772 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 SIRPGQ9P1W8 387 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 KLK13Q9UKR3 277 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CNOT6Q9ULM6 557 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 PYCARDQ9ULZ3 195 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 WASF3Q9UPY6 502 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 PCDHGA1Q9Y5H4 931 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 LY6G6EA0A0G2JKS1 128 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 DKK1O94907 266 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CKMT1AP12532 417 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 ACP1P24666 158 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CCNG2Q16589 344 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 CCDC89Q8N998 374 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 SCG3Q8WXD2 468 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 ARFGAP3Q9NP61 516 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 NFKBIL1Q9UBC1 381 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 OAS3Q9Y6K5 1087 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 U3KQA8 63 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 BPTFQ12830 3046 aa19.78■□□□□ 0.76
TSPAN3-210ENST00000561277 ETS1P14921 441 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 MSNP26038 577 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 ACTN2P35609 894 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 CLDN6P56747 220 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 SHC2P98077 582 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 KCTD11Q693B1 232 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 KLHDC8BQ8IXV7 354 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 SLC35F3Q8IY50 421 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 TRAM1L1Q8N609 369 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 PDCD7Q8N8D1 485 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 GLMNQ92990 594 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 BOCQ9BWV1 1114 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 GULP1Q9UBP9 304 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 GPR34Q9UPC5 381 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 PKP3Q9Y446 797 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 GPSM3Q9Y4H4 160 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 ARL5AQ9Y689 179 aa19.77■□□□□ 0.76
TSPAN3-210ENST00000561277 GOLGA4Q13439 2230 aaKnown RBP19.77■□□□□ 0.75
TSPAN3-210ENST00000561277 CPED1A4D0V7 1026 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 IVLP07476 585 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 ILF3Q12906 894 aaKnown RBP eCLIP19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 NR0B2Q15466 257 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 GUSBP11Q6P575 273 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 GLIS1Q8NBF1 620 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 MS4A14Q96JA4 679 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 PLEKHG4BQ96PX9 1271 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 LRRC40Q9H9A6 602 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 EVA1BQ9NVM1 165 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 PIH1D1Q9NWS0 290 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 IL17CQ9P0M4 197 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 ZKSCAN5Q9Y2L8 839 aa19.76■□□□□ 0.75
TSPAN3-210ENST00000561277 PRKAB1Q9Y478 270 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms