RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FAM213AQ9BRX8 229 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ERP44Q9BS26 406 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TMEM79Q9BSE2 394 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 C11orf84Q9BUA3 381 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 KATNB1Q9BVA0 655 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ELOVL1Q9BW60 279 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZNF416Q9BWM5 594 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CAPS2Q9BXY5 557 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 GCOM2Q9BZD3 368 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 ACPTQ9BZG2 426 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM192AQ9GZU8 254 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ZNF350Q9GZX5 532 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 NACA2Q9H009 215 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 LSG1Q9H089 658 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 ATG10Q9H0Y0 220 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SLCO5A1Q9H2Y9 848 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SNX25Q9H3E2 840 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PDZD7Q9H5P4 517 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TFB2MQ9H5Q4 396 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 RPAP3Q9H6T3 665 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 ANKZF1Q9H8Y5 726 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TM9SF3Q9HD45 589 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 CD93Q9NPY3 652 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PRDM7Q9NQW5 492 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PRMT8Q9NR22 394 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 OLAHQ9NV23 265 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TAS2R14Q9NYV8 317 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TFCP2L1Q9NZI6 479 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 KLHL14Q9P2G3 628 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ARPP21Q9UBL0 812 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 UPB1Q9UBR1 384 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 KCNN3Q9UGI6 736 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 POLLQ9UGP5 575 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 IPO11Q9UI26 975 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 MAD2L2Q9UI95 211 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 DBNLQ9UJU6 430 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 RCOR1Q9UKL0 485 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TSPAN16Q9UKR8 245 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PLA2G4CQ9UP65 541 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 ERVK-11Q9UQG0 969 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 TRAF3IP3Q9Y228 551 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 EXOC6BQ9Y2D4 811 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 YBX2Q9Y2T7 364 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 MRPL11Q9Y3B7 192 aaKnown RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 PCDHGA5Q9Y5G8 931 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 HEMK1Q9Y5R4 338 aaPredicted RBP2.05□□□□□ -2.08
RTF1-207ENST00000561076 PMF1-BGLAPU3KQ54 211 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 U3KQV3 271 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 SPACA6W5XKT8 324 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 FAM205AQ6ZU69 1335 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 PNPLA7Q6ZV29 1317 aa2.05□□□□□ -2.08
RTF1-207ENST00000561076 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A087WV48 116 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A087WZY1 265 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A0B4J203 849 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PRAMEF33A0A0G2JMD5 474 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A1B0GTW7 788 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A1B0GVM2 712 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A1W2PPW3 197 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A0A1W2PQF6 199 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 A1L4Q6 167 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PCP4L1A6NKN8 68 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NOTOA8MTQ0 251 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FOXO6A8MYZ6 492 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MCIDASD6RGH6 385 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 E9PBE3 544 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 AP4M1O00189 453 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 WNT10BO00744 389 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CLDN4O14493 209 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MEIS2O14770 477 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SLC30A4O14863 429 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CLIC2O15247 247 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MAPK13O15264 365 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PPM1DO15297 605 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SLC16A5O15375 505 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MAGEB2O15479 319 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ST8SIA3O43173 380 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MSI1O43347 362 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 NEMFO60524 1076 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PRAMEF10O60809 474 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CBFA2T3O75081 653 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ATP2C2O75185 946 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PMPCBO75439 489 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ERLIN1O75477 346 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GMNNO75496 209 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DAB1O75553 588 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 JRKO75564 520 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RECQL4O94761 1208 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TOMM70O94826 608 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OR6B1O95007 311 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF202O95125 648 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NXPH3O95157 252 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 KAT7O95251 611 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 VNN1O95497 513 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ONECUT2O95948 504 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GH2P01242 217 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FGBP02675 491 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 KLKB1P03952 638 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 S100A9P06702 114 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 HEXAP06865 529 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms