RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 KCND3Q9UK17 655 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 TMEM98Q9Y2Y6 226 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 TRBV23OR9-2A0A075B6M9 112 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 GOLGA6CA6NDK9 693 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 GOLGA6BA6NDN3 693 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 NPIPB15A6NHN6 443 aaPredicted RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 K7EM74 188 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 RFPL1O75677 317 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 MAP3K6O95382 1288 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 GOLGA6DP0CG33 693 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 SLC2A4P14672 509 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 PPM1FP49593 454 aaPredicted RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 DCUN1D2Q6PH85 259 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 DOK6Q6PKX4 331 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 C6orf15Q6UXA7 325 aaPredicted RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 USP45Q70EL2 814 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 PLXDC1Q8IUK5 500 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 NDUFAF2Q8N183 169 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 AVL9Q8NBF6 648 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 SSC4DQ8WTU2 575 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 PDCD6IPQ8WUM4 868 aaKnown RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 AP2M1Q96CW1 435 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 COX14Q96I36 57 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 ABCG8Q9H221 673 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 GOLGA6AQ9NYA3 693 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 PCDHGA6Q9Y5G7 932 aa18.4■□□□□ 0.54
TPM1-226ENST00000560959 MRPS18BQ9Y676 258 aaKnown RBP18.4■□□□□ 0.54
TPM1-226ENST00000560959 OR5K4A6NMS3 321 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 TOX3O15405 576 aaPredicted RBP18.39■□□□□ 0.53
TPM1-226ENST00000560959 PGLSO95336 258 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 NR1D1P20393 614 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 DLSTP36957 453 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 PMS2P54278 862 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 ZNF235Q14590 738 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 SYCP1Q15431 976 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 HSP90AA4PQ58FG1 418 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 CT47A1Q5JQC4 288 aaPredicted RBP18.39■□□□□ 0.53
TPM1-226ENST00000560959 LYSMD3Q7Z3D4 306 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 APLFQ8IW19 511 aaPredicted RBP18.39■□□□□ 0.53
TPM1-226ENST00000560959 NPWQ8N729 165 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 EFCAB3Q8N7B9 438 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 EXD1Q8NHP7 514 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 MGME1Q9BQP7 344 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 HERPUD2Q9BSE4 406 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 ULBP3Q9BZM4 244 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 NOD2Q9HC29 1040 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 VPS18Q9P253 973 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 DACH1Q9UI36 760 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 TLK1Q9UKI8 766 aa18.39■□□□□ 0.53
TPM1-226ENST00000560959 MN1Q10571 1320 aaPredicted RBP18.39■□□□□ 0.53
TPM1-226ENST00000560959 KIR2DS5A0A0G2JLQ3 304 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 A0A0G2JNG1 304 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 TTC24A2A3L6 582 aaPredicted RBP18.38■□□□□ 0.53
TPM1-226ENST00000560959 KIR2DS3K7RE56 304 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 INPP4BO15327 924 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 EML2O95834 649 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 PEX11BO96011 259 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 C9P02748 559 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 ZNF30P17039 623 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 PTSQ03393 145 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 ERV3-1Q14264 604 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 IL11RAQ14626 422 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 KIR2DS5Q14953 304 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 CA9Q16790 459 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 ARMC12Q5T9G4 340 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 HIST2H2BCQ6DN03 193 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 TSPAN33Q86UF1 283 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 BBS5Q8N3I7 341 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 RMI1Q9H9A7 625 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 UCK1Q9HA47 277 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 NLRC4Q9NPP4 1024 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 SAMSN1Q9NSI8 373 aaKnown RBP18.38■□□□□ 0.53
TPM1-226ENST00000560959 GPATCH2LQ9NWQ4 482 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 CROTQ9UKG9 612 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 CREBBPQ92793 2442 aa18.38■□□□□ 0.53
TPM1-226ENST00000560959 A6NCN8 305 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 GOLGA6L3A6NEY3 463 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 LILRA5A6NI73 299 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 TTLL8A6PVC2 850 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 DNAJC6O75061 913 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 FURINP09958 794 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 GNLYP22749 145 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 UQCRFS1P47985 274 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 OGDHQ02218 1023 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 TRAF2Q12933 501 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 NFATC2Q13469 925 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 MARK2Q7KZI7 788 aaKnown RBP18.37■□□□□ 0.53
TPM1-226ENST00000560959 MCOLN2Q8IZK6 566 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 PGBD5Q8N414 524 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 CPT1CQ8TCG5 803 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 PIH1D2Q8WWB5 315 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 KCTD15Q96SI1 283 aaPredicted RBP18.37■□□□□ 0.53
TPM1-226ENST00000560959 SNRNP25Q9BV90 132 aaKnown RBP18.37■□□□□ 0.53
TPM1-226ENST00000560959 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
TPM1-226ENST00000560959 TBC1D29Q9UFV1 150 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 ZNHIT2Q9UHR6 403 aa18.37■□□□□ 0.53
TPM1-226ENST00000560959 DDAH2O95865 285 aa18.36■□□□□ 0.53
TPM1-226ENST00000560959 F3P13726 295 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms