RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	BTBD6	Q96KE9	485 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	CCDC74B	Q96LY2	380 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	WDR24	Q96S15	920 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	LYSMD1	Q96S90	227 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	AGAP2	Q99490	1192 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	SLC12A9	Q9BXP2	914 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	POLR1E	Q9GZS1	481 aa	Known RBP	13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	CD84	Q9UIB8	345 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	CNOT6	Q9ULM6	557 aa	Known RBP	13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	PTPN13	Q12923	2485 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	GOLGA6C	A6NDK9	693 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	GOLGA6B	A6NDN3	693 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754		B4E171	279 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	STMND1	H3BQB6	276 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	MYO1F	O00160	1098 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	SLC28A2	O43868	658 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	DNAJC6	O75061	913 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	WISP1	O95388	367 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	SERPING1	P05155	500 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CD48	P09326	243 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	GOLGA6D	P0CG33	693 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	THRA	P10827	490 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	TSPAN7	P41732	249 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ACTR1B	P42025	376 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ACTR1A	P61163	376 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	RPL26	P61254	145 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	GPLD1	P80108	840 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ITK	Q08881	620 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	DPYSL3	Q14195	570 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	IFI16	Q16666	785 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CCDC122	Q5T0U0	273 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ARHGAP22	Q7Z5H3	698 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	SFRP1	Q8N474	314 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	HTR3C	Q8WXA8	447 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	OR2M4	Q96R27	311 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ARHGAP9	Q9BRR9	750 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	FUCA2	Q9BTY2	467 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	RIOK2	Q9BVS4	552 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	NUP85	Q9BW27	656 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	DDA1	Q9BW61	102 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ASPSCR1	Q9BZE9	553 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CLMP	Q9H6B4	373 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	WDR70	Q9NW82	654 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	GOLGA6A	Q9NYA3	693 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	ANAPC7	Q9UJX3	599 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CAPN11	Q9UMQ6	739 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	RPL26L1	Q9UNX3	145 aa	Known RBP	13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	CHKB	Q9Y259	395 aa		13.56	□□□□□ -0.24
RNF31-223	ENST00000560754	COL12A1	Q99715	3063 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	SUV39H1	O43463	412 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	CLDN7	O95471	211 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	EML2	O95834	649 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	SERPINC1	P01008	464 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	CSF2RB	P32927	897 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	CSTF2	P33240	577 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	UGT1A3	P35503	534 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	CYP4F2	P78329	520 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	NIPAL4	Q0D2K0	466 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	NFATC3	Q12968	1075 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	KRT81	Q14533	505 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	PDK2	Q15119	407 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	HADH	Q16836	314 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	ANKRD20A8P	Q5CZ79	823 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	NCBP2-AS2	Q69YL0	99 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	TIGD7	Q6NT04	549 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	ALKBH5	Q6P6C2	394 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	IYD	Q6PHW0	289 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	DOK6	Q6PKX4	331 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	WDR74	Q6RFH5	385 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	BMPER	Q8N8U9	685 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	PMEPA1	Q969W9	287 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	TDRD1	Q9BXT4	1180 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	FAM117A	Q9C073	453 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	OCIAD1	Q9NX40	245 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	KCNK4	Q9NYG8	393 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	VPS18	Q9P253	973 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	IL17B	Q9UHF5	180 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	DNPEP	Q9ULA0	475 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	B3GALT1	Q9Y5Z6	326 aa		13.55	□□□□□ -0.24
RNF31-223	ENST00000560754	RGSL1	A5PLK6	1076 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	ANKRD66	B4E2M5	251 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	FAM87A	P0C7U9	286 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	CSRP3	P50461	194 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	EPHB1	P54762	984 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	ZBED6	P86452	979 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	DSC2	Q02487	901 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	SLC10A2	Q12908	348 aa	Predicted RBP	13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	BIRC2	Q13490	618 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	TRIM74	Q86UV6	250 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	GALNT13	Q8IUC8	556 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	KCTD6	Q8NC69	237 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	SLC37A2	Q8TED4	501 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	ART4	Q93070	314 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	FAF2	Q96CS3	445 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	RMI1	Q9H9A7	625 aa		13.54	□□□□□ -0.24
RNF31-223	ENST00000560754	PCDH9	Q9HC56	1237 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms