RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SLC26A7Q8TE54 656 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 HPS1Q92902 700 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 CNBD2Q96M20 576 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF641Q96N77 438 aaPredicted RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 LENG8Q96PV6 779 aaPredicted RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 EDEM2Q9BV94 578 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 REXO4Q9GZR2 422 aaKnown RBP6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 TRABDQ9H4I3 376 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 THAP1Q9NVV9 213 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 MARCH2Q9P0N8 246 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 SH3BP4Q9P0V3 963 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 MAGEL2Q9UJ55 1249 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 PCDHGA1Q9Y5H4 931 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 AP4B1Q9Y6B7 739 aa6.75□□□□□ -1.33
TSPAN3-209ENST00000560715 PVALEFA0A1B0GWK0 134 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CLOCKO15516 846 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TSPAN1O60635 241 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SEC22BO75396 215 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PRAMEF12O95522 483 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 F11P03951 625 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 C8BP07358 591 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PRR35P0CG20 571 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SFTPCP11686 197 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 IFNA8P32881 189 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CAPZA2P47755 286 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ALDH1A3P47895 512 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CENPAP49450 140 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ATP6V0D1P61421 351 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ASIC1P78348 528 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CCNIQ14094 377 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 UBAP2LQ14157 1087 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 GK3PQ14409 553 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 OXA1LQ15070 435 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 NPY5RQ15761 445 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PCSK7Q16549 785 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 MOGQ16653 247 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TRIM16LQ309B1 348 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FRA10AC1Q70Z53 315 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 MED25Q71SY5 747 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TRIML2Q8N7C3 387 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SDR42E1Q8WUS8 393 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 OSCP1Q8WVF1 389 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PSPC1Q8WXF1 523 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ATL1Q8WXF7 558 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FAR2Q96K12 515 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PHF7Q9BWX1 381 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 NMUR2Q9GZQ4 415 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 GLT8D2Q9H1C3 349 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 GANQ9H2C0 597 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 HIPK3Q9H422 1215 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 MTG2Q9H4K7 406 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 C12orf10Q9HB07 376 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SARS2Q9NP81 518 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 LTB4R2Q9NPC1 389 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ARMCX1Q9P291 453 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 NCDNQ9UBB6 729 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CYP26A1O43174 497 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TYROBPO43914 113 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CCNT2O60583 730 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 UFL1O94874 794 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 OLFM2O95897 454 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ENO1P06733 434 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 POLR2MP0CAP2 368 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CKBP12277 381 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC130P13994 396 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 DDX5P17844 614 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CA4P22748 312 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 COILP38432 576 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CAMLGP49069 296 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 NT5C2P49902 561 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 YWHAGP61981 247 aaKnown RBP eCLIP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 VAMP2P63027 116 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PPATQ06203 517 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CUL2Q13617 745 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TUBA3CQ13748 450 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 HABP2Q14520 560 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC58Q4VC31 144 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FOXR2Q6PJQ5 311 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 C15orf52Q6ZUT6 534 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 PLEKHM3Q6ZWE6 761 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF598Q86UK7 904 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CCDC105Q8IYK2 499 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CADM3Q8N126 398 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FBXO15Q8NCQ5 510 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 LRRC15Q8TF66 581 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF384Q8TF68 577 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TRUB1Q8WWH5 349 aaKnown RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ALG3Q92685 438 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 INTS14Q96SY0 518 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FERMT1Q9BQL6 677 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 TRIM54Q9BYV2 358 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SHCBP1LQ9BZQ2 653 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 MARCH7Q9H992 704 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 SMURF2Q9HAU4 748 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 CD209Q9NNX6 404 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 FSCN3Q9NQT6 498 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms