RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 TEAD1P28347 426 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 CHRNA4P43681 627 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 GEMP55040 296 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 MPP3Q13368 585 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 BIRC2Q13490 618 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 KYQ8NBH2 561 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 CCL4L1Q8NHW4 92 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 CDH19Q9H159 772 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 GBA3Q9H227 469 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 RAD18Q9NS91 495 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 ZNHIT2Q9UHR6 403 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 U3KQA8 63 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 FRYQ5TBA9 3013 aa12.9□□□□□ -0.34
CTDSPL2-209ENST00000560620 PLXNB3Q9ULL4 1909 aa12.9□□□□□ -0.35
CTDSPL2-209ENST00000560620 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRABD2BA6NFA1 517 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 MT-CO3P00414 261 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 SLC1A5Q15758 541 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 SIRPB2Q5JXA9 342 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZNF569Q5MCW4 686 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 HENMT1Q5T8I9 393 aaKnown RBP12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 KDELC1Q6UW63 502 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 GLT6D1Q7Z4J2 308 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 NLRP8Q86W28 1048 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 GALNT13Q8IUC8 556 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 RAVER1Q8IY67 606 aaKnown RBP12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 GPR26Q8NDV2 337 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCDC110Q8TBZ0 833 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 MDM1Q8TC05 714 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 DEPDC7Q96QD5 511 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 OR2M4Q96R27 311 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZMIZ1Q9ULJ6 1067 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 SLC17A4Q9Y2C5 497 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 AAR2Q9Y312 384 aaKnown RBP12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 ACACBO00763 2458 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
CTDSPL2-209ENST00000560620 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 FADS2P1A8MWK0 482 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 AURKAO14965 403 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZNF189O75820 626 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 SLC25A14O95258 325 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 EPOP01588 193 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 FUCA1P04066 466 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 IVLP07476 585 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 HLA-DPA1P20036 260 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 AK4P27144 223 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 PSMB4P28070 264 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ADCY8P40145 1251 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ACTR1BP42025 376 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ACTR1AP61163 376 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 CTBSQ01459 385 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 CYP4F3Q08477 520 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 PEX6Q13608 980 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 CHST15Q7LFX5 561 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 TMC3Q7Z5M5 1100 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 GDAP1Q8TB36 358 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 GPBAR1Q8TDU6 330 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZDHHC1Q8WTX9 485 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCDC74AQ96AQ1 378 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 EID2BQ96D98 161 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 NXPE2Q96DL1 559 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 MRGPRX2Q96LB1 330 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 WDR24Q96S15 920 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 APOL2Q9BQE5 337 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 ARFGAP3Q9NP61 516 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 HACD3Q9P035 362 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
CTDSPL2-209ENST00000560620 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms