RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 CCNL2Q96S94 520 aaPredicted RBP20.53■□□□□ 0.88
ETFA-213ENST00000560309 SRPK1Q96SB4 655 aaKnown RBP20.53■□□□□ 0.88
ETFA-213ENST00000560309 PACSIN1Q9BY11 444 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 CPNE5Q9HCH3 593 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 RAD18Q9NS91 495 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 SEPT10Q9P0V9 454 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 CD84Q9UIB8 345 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 INTUQ9ULD6 942 aa20.53■□□□□ 0.88
ETFA-213ENST00000560309 LRRD1A4D1F6 860 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 CASC3O15234 703 aaKnown RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 B4GAT1O43505 415 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 JCHAINP01591 159 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 ALDH4A1P30038 563 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 ACTR1BP42025 376 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 POLD2P49005 469 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 ACTR1AP61163 376 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 NIPAL4Q0D2K0 466 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 SLC10A2Q12908 348 aaPredicted RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 CLN3Q13286 438 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 TCEAL1Q15170 157 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 MAP9Q49MG5 647 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 SLC9A4Q6AI14 798 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 SLC30A9Q6PML9 568 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 JAMLQ86YT9 394 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 GALNT13Q8IUC8 556 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 VSTM4Q8IW00 320 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 LPCAT1Q8NF37 534 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 SCAMP4Q969E2 229 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 RIOK2Q9BVS4 552 aaKnown RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 FAM83DQ9H4H8 585 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 NHEJ1Q9H9Q4 299 aaPredicted RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 ABHD10Q9NUJ1 306 aa20.52■□□□□ 0.88
ETFA-213ENST00000560309 DDX56Q9NY93 547 aaKnown RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 ATXN7L1Q9ULK2 861 aaPredicted RBP20.52■□□□□ 0.88
ETFA-213ENST00000560309 APOL1O14791 398 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 PPP1R12AO14974 1030 aaPredicted RBP20.51■□□□□ 0.87
ETFA-213ENST00000560309 MAP3K6O95382 1288 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 CLDN7O95471 211 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 AK4P27144 223 aaPredicted RBP20.51■□□□□ 0.87
ETFA-213ENST00000560309 SPINT3P49223 89 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 SLC14A2Q15849 920 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 DOK6Q6PKX4 331 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 NAGSQ8N159 534 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 PISDQ9UG56 409 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 AHCTF1Q8WYP5 2266 aa20.51■□□□□ 0.87
ETFA-213ENST00000560309 C1orf232A0A0U1RR37 186 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 ASMTLO95671 621 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 LIPCP11150 499 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 SLC2A4P14672 509 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 CD86P42081 329 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 FASLGP48023 281 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 MAZP56270 477 aaKnown RBP20.5■□□□□ 0.87
ETFA-213ENST00000560309 OR1D5P58170 312 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 GPLD1P80108 840 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 IHHQ14623 411 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 PTPRRQ15256 657 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 QPCTQ16769 361 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 PHF19Q5T6S3 580 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 XKR5Q6UX68 686 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 RHOT1Q8IXI2 618 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.5■□□□□ 0.87
ETFA-213ENST00000560309 PLD5Q8N7P1 536 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 AVL9Q8NBF6 648 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 SUDS3Q9H7L9 328 aaPredicted RBP20.5■□□□□ 0.87
ETFA-213ENST00000560309 TMEM98Q9Y2Y6 226 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 PCDHB11Q9Y5F2 797 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 HEY1Q9Y5J3 304 aa20.5■□□□□ 0.87
ETFA-213ENST00000560309 PMS2P1A4D2B8 440 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 GPR89AB7ZAQ6 455 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 GPR89BP0CG08 455 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 NR2C2P49116 596 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 CFHR1Q03591 330 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 AP1B1Q10567 949 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 AMZ1Q400G9 498 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 HENMT1Q5T8I9 393 aaKnown RBP20.49■□□□□ 0.87
ETFA-213ENST00000560309 CCDC70Q6NSX1 233 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 RFLNAQ6ZTI6 216 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 NT5DC3Q86UY8 548 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 CPNE8Q86YQ8 564 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 SFTPA2Q8IWL1 248 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 CCDC112Q8NEF3 446 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 OR4D9Q8NGE8 314 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 SH3KBP1Q96B97 665 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 TSPY26PQ9H489 355 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 STN1Q9H668 368 aaKnown RBP20.49■□□□□ 0.87
ETFA-213ENST00000560309 MAGEE1Q9HCI5 957 aa20.49■□□□□ 0.87
ETFA-213ENST00000560309 SCN8AQ9UQD0 1980 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 OR5K4A6NMS3 321 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 KCNK1O00180 336 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 MFAP3LO75121 409 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 MMP2P08253 660 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 HGFP14210 728 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 CD1CP29017 333 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 LIMK2P53671 638 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 PDPK2PQ6A1A2 396 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 CNTD1Q8N815 330 aa20.48■□□□□ 0.87
ETFA-213ENST00000560309 PTCD2Q8WV60 388 aaKnown RBP20.48■□□□□ 0.87
ETFA-213ENST00000560309 IMP4Q96G21 291 aaKnown RBP20.48■□□□□ 0.87
ETFA-213ENST00000560309 AGAP2Q99490 1192 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms