RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TAZQ16635 292 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 IFI16Q16666 785 aaKnown RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 WSCD2Q2TBF2 565 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 INAVAQ3KP66 663 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF542PQ5EBM4 170 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 RALGPS1Q5JS13 557 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 FAM182AQ5T1J6 154 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 TIGD7Q6NT04 549 aaPredicted RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 C11orf63Q6NUN7 778 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 NPNTQ6UXI9 565 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 LIPIQ6XZB0 460 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DPPA4Q7L190 304 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 TMTC1Q8IUR5 882 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 BBS5Q8N3I7 341 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 SLC25A45Q8N413 288 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 CHCHD4Q8N4Q1 142 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 EID2Q8N6I1 236 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PNPLA1Q8N8W4 532 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 ACRBPQ8NEB7 543 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 NSMCE1Q8WV22 266 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 ADAMTS14Q8WXS8 1223 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 OLFM3Q96PB7 478 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 LGMNQ99538 433 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 SEMA3CQ99985 751 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 SCNM1Q9BWG6 230 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 POLR1EQ9GZS1 481 aaKnown RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DDX56Q9NY93 547 aaKnown RBP6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 B4GALT6Q9UBX8 382 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 FTSJ1Q9UET6 329 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 KLK13Q9UKR3 277 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 PCDHB14Q9Y5E9 798 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DUSP10Q9Y6W6 482 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 ASXL3Q9C0F0 2248 aa6.04□□□□□ -1.44
CTDSPL2-204ENST00000558966 DSPP15924 2871 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ACACAQ13085 2346 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PKD1L2Q7Z442 2459 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CFAP69A5D8W1 941 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 A8MX80 341 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 KCNK1O00180 336 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRIM38O00635 465 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ADAM11O75078 769 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 RECQL5O94762 991 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PGLSO95336 258 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 LDOC1O95751 146 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CSF2P04141 144 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PDHA1P08559 390 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ELFN1P0C7U0 828 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 KRT10P13645 584 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CCNB1P14635 433 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 NME1P15531 152 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 LHCGRP22888 699 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CDKN2BP42772 138 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 POLR2LP62875 67 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 DYNLT1P63172 113 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 IFI35P80217 286 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ADCY2Q08462 1091 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PPIDQ08752 370 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 NIPAL4Q0D2K0 466 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 DNAJC3Q13217 504 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CNGA3Q16281 694 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PARGQ86W56 976 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 DCP2Q8IU60 420 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CCDC13Q8IYE1 715 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PELI3Q8N2H9 469 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CNTD1Q8N815 330 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ZNF548Q8NEK5 533 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 ARRDC2Q8TBH0 407 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PDCD6IPQ8WUM4 868 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PIH1D2Q8WWB5 315 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 KRT35Q92764 455 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 CNDP2Q96KP4 475 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 SMIM14Q96QK8 99 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 MCCC1Q96RQ3 725 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 IL12RB2Q99665 862 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 C1QTNF7Q9BXJ2 289 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 TCEAL2Q9H3H9 227 aaPredicted RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 RBM22Q9NW64 420 aaKnown RBP eCLIP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 DNAJC28Q9NX36 388 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 AMACRQ9UHK6 382 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 HEY1Q9Y5J3 304 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 RAI2Q9Y5P3 530 aa6.03□□□□□ -1.44
CTDSPL2-204ENST00000558966 A0A0U1RQJ8 604 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 A0A0U1RQS6 177 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 A0A1W2PQ67 120 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 NPIPB15A6NHN6 443 aaPredicted RBP6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 BTNL10A8MVZ5 291 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 KLF4O43474 513 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 DEAF1O75398 565 aaPredicted RBP6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 HEXIM1O94992 359 aaKnown RBP6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 TRIM16O95361 564 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 DLGAP3O95886 979 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 PRLP01236 227 aa6.02□□□□□ -1.44
CTDSPL2-204ENST00000558966 JCHAINP01591 159 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms