RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NUMA1Q14980 2115 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 A0A1W2PQU0 124 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 RASGRF2O14827 1237 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A9O60656 530 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 RNGTTO60942 597 aaKnown RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 PRSS56P0CW18 603 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 OXTRP30559 389 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 SLC1A2P43004 574 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 MSH2P43246 934 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 PXNP49023 591 aaPredicted RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 CTBP1Q13363 440 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 NFATC2Q13469 925 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 AGERQ15109 404 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 ZRANB3Q5FWF4 1079 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 SNX20Q7Z614 316 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 SLC26A11Q86WA9 606 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 HORMAD1Q86X24 394 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 TDRPQ86YL5 185 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 DENND6AQ8IWF6 608 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 PIANPQ8IYJ0 282 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 C2CD4AQ8NCU7 369 aaPredicted RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 OR2T34Q8NGX1 318 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 ZNF398Q8TD17 642 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 EPS8L3Q8TE67 593 aaKnown RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 MRRFQ96E11 262 aaKnown RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 NUS1Q96E22 293 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 RIOK2Q9BVS4 552 aaKnown RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 C1QTNF2Q9BXJ5 285 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 FAM96AQ9H5X1 160 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A7Q9HAW7 530 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A10Q9HAW8 530 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A8Q9HAW9 530 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 SPATA6Q9NWH7 488 aaPredicted RBP17.99■□□□□ 0.47
CLPX-203ENST00000558958 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 NSMCE4AQ9NXX6 385 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 FBXO5Q9UKT4 447 aa17.99■□□□□ 0.47
CLPX-203ENST00000558958 LRRK1Q38SD2 2015 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 PRR23AA6NEV1 266 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 FAM47DPA6NHR8 397 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 LRRC72A6NJI9 287 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 AGAP14A8MT82 685 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 C10orf142B7Z368 130 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 AGPSO00116 658 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 GPR39O43194 453 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 ITGALP20701 1170 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 OGNP20774 298 aaKnown RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 CDKN1CP49918 316 aaPredicted RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 DPTQ07507 201 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 SEMA3AQ14563 771 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 MAP7D1Q3KQU3 841 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 GPR33Q49SQ1 333 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 PSAPL1Q6NUJ1 521 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 KIAA0408Q6ZU52 694 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 SDCCAG8Q86SQ7 713 aaPredicted RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 NLRP8Q86W28 1048 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 TRAM1L1Q8N609 369 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 OTUD6BQ8N6M0 293 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 PNPLA1Q8N8W4 532 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 DCAKDQ8WVC6 231 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 AP2M1Q96CW1 435 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 TOE1Q96GM8 510 aaKnown RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 CPNE1Q99829 537 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 SPATA16Q9BXB7 569 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 ASB8Q9H765 288 aa17.98■□□□□ 0.47
CLPX-203ENST00000558958 WSB2Q9NYS7 404 aaPredicted RBP17.98■□□□□ 0.47
CLPX-203ENST00000558958 FAM155BO75949 473 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 SEMA4FO95754 770 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 INHBAP08476 426 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A6P19224 532 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A1P22309 533 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A4P22310 534 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 GABRB3P28472 473 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 CD6P30203 668 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 HOXA6P31267 233 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 CA5AP35218 305 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A3P35503 534 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 UGT1A5P35504 534 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 PPP2CBP62714 309 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 PPP2CAP67775 309 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 MPP1Q00013 466 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ITGA9Q13797 1035 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 FGL2Q14314 439 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 RASA2Q15283 850 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 TYSND1Q2T9J0 566 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ATP13A5Q4VNC0 1218 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ADGRD1Q6QNK2 874 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 PACS1Q6VY07 963 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 STRA8Q7Z7C7 330 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 GALNT7Q86SF2 657 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 LDB1Q86U70 411 aaPredicted RBP17.97■□□□□ 0.47
CLPX-203ENST00000558958 TRIM69Q86WT6 500 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 RUFY1Q96T51 708 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 TCF12Q99081 682 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 MCMBPQ9BTE3 642 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ZSCAN5AQ9BUG6 496 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms