RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PRPF38BQ5VTL8 546 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 HGSNATQ68CP4 663 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF782Q6ZMW2 699 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GALNT7Q86SF2 657 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PGAM4Q8N0Y7 254 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MRPL48Q96GC5 212 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ASPNQ9BXN1 380 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ERVK-19Q9WJR5 959 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 BTRCQ9Y297 605 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GAKO14976 1311 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SLC2A3P11169 496 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RPL7AP62424 266 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CBFBQ13951 182 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 INTS11Q5TA45 600 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CEACAM19Q7Z692 300 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PHF13Q86YI8 300 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MOSPD2Q8NHP6 518 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CDHR5Q9HBB8 845 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SLC27A5Q9Y2P5 690 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PRSS44E7EML9 344 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NNMTP40261 264 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RBM48Q5RL73 367 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 OR10Q1Q8NGQ4 319 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TNIP3Q96KP6 325 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 KCND2Q9NZV8 630 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NSD2O96028 1365 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 BCKDKO14874 412 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MYCP01106 439 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MTHFD1P11586 935 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 AZGP1P25311 298 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CRKLP46109 303 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CDC42EP5Q6NZY7 148 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GTPBP8Q8N3Z3 284 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TEX47Q8TBZ9 253 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 HEXDCQ8WVB3 486 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CAMKK2Q96RR4 588 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SOX17Q9H6I2 414 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 FAM205AQ6ZU69 1335 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 EI24O14681 340 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DLDP09622 509 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 COL6A2P12110 1019 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 BMP2P12643 396 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CES1P23141 567 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MPP1Q00013 466 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GK3PQ14409 553 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SH3D19Q5HYK7 790 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 METTL2BQ6P1Q9 378 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM132CQ8N3T6 1108 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 METTL2AQ96IZ6 378 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SUCOQ9UBS9 1254 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MFHAS1Q9Y4C4 1052 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RRN3P2A6NIE6 340 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PLA2G6O60733 806 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PRG2P13727 222 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ACO1P21399 889 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GRSF1Q12849 480 aaKnown RBP eCLIP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 FGD3Q5JSP0 725 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PGM2L1Q6PCE3 622 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZYG11AQ6WRX3 759 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TMIEQ8NEW7 156 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NKD2Q969F2 451 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MMP28Q9H239 520 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SEC14L4Q9UDX3 406 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PLEKHA6Q9Y2H5 1048 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RPL36Q9Y3U8 105 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 OR6C65A6NJZ3 312 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GRIA2P42262 883 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CDH4P55283 916 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PITPNAQ00169 270 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF404Q494X3 552 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ASB2Q96Q27 587 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 UCK2Q9BZX2 261 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MROH7-TTC4A0A0A0MT08 1334 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ATE1O95260 518 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RPLP0P05388 317 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CLTBP09497 229 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF3P17036 446 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ELK4P28324 431 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PPP4CP60510 307 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 FSTL4Q6MZW2 842 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 P2RY8Q86VZ1 359 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PTGR2Q8N8N7 351 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DDX1Q92499 740 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 KCTD10Q9H3F6 313 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ERVK13-1Q9NX77 482 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MS4A12Q9NXJ0 267 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TAS2R7Q9NYW3 318 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DHRS7Q9Y394 339 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NDST3O95803 873 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 HMGN1P05114 100 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 EPORP19235 508 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RPL10P27635 214 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PDHA2P29803 388 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GUCA1AP43080 201 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 RHEBQ15382 184 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GPR68Q15743 365 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 EXOC3L2Q2M3D2 409 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 FBXO43Q4G163 708 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 KLHL22Q53GT1 634 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms