RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SPINT3P49223 89 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 GALNT3Q14435 633 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 SLC14A2Q15849 920 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 PPP2R5EQ16537 467 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 ISXQ2M1V0 245 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 BZW1Q7L1Q6 419 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 DAAM2Q86T65 1068 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 ACRBPQ8NEB7 543 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 FAM46DQ8NEK8 389 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 SPATA22Q8NHS9 363 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 TFB1MQ8WVM0 346 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 SCARF2Q96GP6 870 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 COX14Q96I36 57 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 CCDC3Q9BQI4 270 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 HERPUD2Q9BSE4 406 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 RIOK2Q9BVS4 552 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 ADGRE3Q9BY15 652 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 CARS2Q9HA77 564 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 SPATS2LQ9NUQ6 558 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 TRNAU1APQ9NX07 287 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 GOLGA6AQ9NYA3 693 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 CNOT6Q9ULM6 557 aaKnown RBP8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 SUFUQ9UMX1 484 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 TMEM98Q9Y2Y6 226 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 GPSM3Q9Y4H4 160 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 PCDHA3Q9Y5H8 950 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 AK5Q9Y6K8 562 aa8.74□□□□□ -1.01
SNRPA1-206ENST00000558059 A0A1W2PQM1 296 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 GRID2IPA4D2P6 1211 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 RGSL1A5PLK6 1076 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 BRINP1O60477 761 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 USP12O75317 370 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PMPCBO75439 489 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 TCEA3O75764 348 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 FGF1P05230 155 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PYGLP06737 847 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PIRTP0C851 137 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CTNNA2P26232 953 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 AK4P27144 223 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 ADCY8P40145 1251 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 GNPDA1P46926 289 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 VAV2P52735 878 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PDX1P52945 283 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 COPS2P61201 443 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CCL7P80098 99 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CDK18Q07002 472 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 HLTFQ14527 1009 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 LAPTM4AQ15012 233 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CERCAMQ5T4B2 595 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 HENMT1Q5T8I9 393 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 DOK6Q6PKX4 331 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 C19orf48Q6RUI8 117 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 RBM44Q6ZP01 1051 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 BBS12Q6ZW61 710 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 LYSMD3Q7Z3D4 306 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 KDELC2Q7Z4H8 507 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 TMC3Q7Z5M5 1100 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 TRIM74Q86UV6 250 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 ZC3H18Q86VM9 953 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 C17orf82Q86X59 251 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CCDC50Q8IVM0 306 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 LRRC57Q8N9N7 239 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 OR6C4Q8NGE1 309 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 P3H4Q92791 437 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 CCDC74AQ96AQ1 378 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 HAUS1Q96CS2 278 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 RBM41Q96IZ5 413 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 BAG1Q99933 345 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 HEMGNQ9BXL5 484 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 FAM83DQ9H4H8 585 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 SUDS3Q9H7L9 328 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 MAGEE1Q9HCI5 957 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 APPL1Q9UKG1 709 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 RALYQ9UKM9 306 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 EFR3BQ9Y2G0 817 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PLEKHM1Q9Y4G2 1056 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 PCYT1BQ9Y5K3 369 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 ENTPD2Q9Y5L3 495 aa8.73□□□□□ -1.01
SNRPA1-206ENST00000558059 A0A087WV48 116 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 A0A0U1RQJ8 604 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 LOC285095A0A1B0GVY8 99 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 FADS2P1A8MWK0 482 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 HACD1B0YJ81 288 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 B4DGG1 531 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 INPP4BO15327 924 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 MTSS1O43312 755 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 IPO7O95373 1038 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 NDST3O95803 873 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 MPOP05164 745 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 PNLIPP16233 465 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 GLB1P16278 677 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 NFKB1P19838 968 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 CDC25BP30305 580 aa8.72□□□□□ -1.01
SNRPA1-206ENST00000558059 LSSP48449 732 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms