RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
SNX1-203ENST00000558040 TCF12Q99081 682 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 SH3GL2Q99962 352 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 FAM83DQ9H4H8 585 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 TMBIM4Q9HC24 238 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 MED4Q9NPJ6 270 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 SLC17A6Q9P2U8 582 aa16.8■□□□□ 0.28
SNX1-203ENST00000558040 ZNF106Q9H2Y7 1883 aaKnown RBP16.8■□□□□ 0.28
SNX1-203ENST00000558040 UGT1A9O60656 530 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 MMP20O60882 483 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 TM7SF2O76062 418 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 APBB3O95704 486 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 SPRP35270 261 aaPredicted RBP16.79■□□□□ 0.28
SNX1-203ENST00000558040 ETV3P41162 512 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 TPMTP51580 245 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ADPRHP54922 357 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 RPS21P63220 83 aaKnown RBP16.79■□□□□ 0.28
SNX1-203ENST00000558040 CREB5Q02930 508 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 CTBP1Q13363 440 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 NFATC2Q13469 925 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 TYSND1Q2T9J0 566 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ANO7Q6IWH7 933 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 TAS2R42Q7RTR8 314 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 DENND6AQ8IWF6 608 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ZNF398Q8TD17 642 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ULK4Q96C45 1275 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 MTBPQ96DY7 904 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 NUS1Q96E22 293 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 HHIPQ96QV1 700 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 RBBP8Q99708 897 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ZSCAN5AQ9BUG6 496 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 SPATA16Q9BXB7 569 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ASB8Q9H765 288 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 UGT1A7Q9HAW7 530 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 UGT1A10Q9HAW8 530 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 UGT1A8Q9HAW9 530 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 ITM2CQ9NQX7 267 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 INTS10Q9NVR2 710 aaKnown RBP16.79■□□□□ 0.28
SNX1-203ENST00000558040 USP36Q9P275 1121 aaKnown RBP16.79■□□□□ 0.28
SNX1-203ENST00000558040 MARCH4Q9P2E8 410 aaPredicted RBP16.79■□□□□ 0.28
SNX1-203ENST00000558040 CTNNAL1Q9UBT7 734 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 TBK1Q9UHD2 729 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 CRLS1Q9UJA2 301 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 PSAT1Q9Y617 370 aa16.79■□□□□ 0.28
SNX1-203ENST00000558040 LRRC72A6NJI9 287 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 GAPDHSO14556 408 aaPredicted RBP16.78■□□□□ 0.28
SNX1-203ENST00000558040 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
SNX1-203ENST00000558040 SNRPAP09012 282 aaKnown RBP16.78■□□□□ 0.28
SNX1-203ENST00000558040 LEPRP48357 1165 aaKnown RBP16.78■□□□□ 0.28
SNX1-203ENST00000558040 CD151P48509 253 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 LIMK2P53671 638 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 MPP1Q00013 466 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 CHRNA6Q15825 494 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 AGBL2Q5U5Z8 902 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 CAMKK1Q8N5S9 505 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 TRAM1L1Q8N609 369 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 ZBTB9Q96C00 473 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 AP2M1Q96CW1 435 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 C1QTNF7Q9BXJ2 289 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 BTBD1Q9H0C5 482 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 RHOJQ9H4E5 214 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 EURLQ9NYK6 297 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 CD84Q9UIB8 345 aa16.78■□□□□ 0.28
SNX1-203ENST00000558040 CORO1CQ9ULV4 474 aaPredicted RBP16.78■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3DA0A087WVF3 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3IA0A087WXS9 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3EA0A087X179 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3KA0A087X1G2 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TRBV5-4A0A0C4DH59 114 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3FA6NER0 549 aaPredicted RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 GOLGA8CPA6NN73 597 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3LB9A6J9 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 ZNF217O75362 1048 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 NDUFS3O75489 264 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 FAM155BO75949 473 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 IGLV3-19P01714 112 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 PYGLP06737 847 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 DCNP07585 359 aaKnown RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3HP0C7X1 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 KRT15P19012 456 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 OXTRP30559 389 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 CCR3P51677 355 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 MTAPQ13126 283 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 HENMT1Q5T8I9 393 aaKnown RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3GQ6DHY5 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3CQ6IPX1 549 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 PSAPL1Q6NUJ1 521 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 RFLNAQ6ZTI6 216 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 FAM124AQ86V42 546 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 NLRP8Q86W28 1048 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 TBC1D3Q8IZP1 549 aaPredicted RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 RIOK2Q9BVS4 552 aaKnown RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 ABCG8Q9H221 673 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 FAM96AQ9H5X1 160 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 FBXO6Q9NRD1 293 aaPredicted RBP16.77■□□□□ 0.28
SNX1-203ENST00000558040 SMOXQ9NWM0 555 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms