RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PYCARD-AS1I3L0S3 204 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 KCNK1O00180 336 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 ATP1A1P05023 1023 aaKnown RBP16.62■□□□□ 0.25
NEK9-211ENST00000557673 MMP12P39900 470 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 CSRP3P50461 194 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 SCNN1BP51168 640 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 RENBPP51606 427 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 SRP54P61011 504 aaKnown RBP16.62■□□□□ 0.25
NEK9-211ENST00000557673 AP1S1P61966 158 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 CCL7P80098 99 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 BCL2L1Q07817 233 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 NSUN2Q08J23 767 aaKnown RBP eCLIP16.62■□□□□ 0.25
NEK9-211ENST00000557673 ZBTB17Q13105 803 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 NFATC4Q14934 902 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 MARC1Q5VT66 337 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 ERAP2Q6P179 960 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 ENPP7Q6UWV6 458 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 RD3Q7Z3Z2 195 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 B3GNT8Q7Z7M8 397 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 BBS5Q8N3I7 341 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 PAF1Q8N7H5 531 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 ZSCAN1Q8NBB4 408 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
NEK9-211ENST00000557673 TSACCQ96A04 125 aaPredicted RBP16.62■□□□□ 0.25
NEK9-211ENST00000557673 LRRN3Q9H3W5 708 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 KLQ9UEF7 1012 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 ATP8A1Q9Y2Q0 1164 aa16.62■□□□□ 0.25
NEK9-211ENST00000557673 KIF26BQ2KJY2 2108 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 HACD1B0YJ81 288 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 EFSO43281 561 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 TNFP01375 233 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 HLA-DQB2P05538 268 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 CELA2BP08218 269 aaPredicted RBP16.61■□□□□ 0.25
NEK9-211ENST00000557673 LIPCP11150 499 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 CCNB1P14635 433 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 CR2P20023 1033 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 AP1B1Q10567 949 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 NFATC3Q12968 1075 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 XRCC4Q13426 336 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 INPP5AQ14642 412 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 ALG11Q2TAA5 492 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 WSCD2Q2TBF2 565 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 ALG1LQ6GMV1 187 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 ZC3H18Q86VM9 953 aaKnown RBP16.61■□□□□ 0.25
NEK9-211ENST00000557673 SLC13A5Q86YT5 568 aaPredicted RBP16.61■□□□□ 0.25
NEK9-211ENST00000557673 ECHDC3Q96DC8 303 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 APOOQ9BUR5 198 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 FOXP3Q9BZS1 431 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 NT5MQ9NPB1 228 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 AMACRQ9UHK6 382 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 APPL1Q9UKG1 709 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 R3HDM2Q9Y2K5 976 aaKnown RBP16.61■□□□□ 0.25
NEK9-211ENST00000557673 PCDHB11Q9Y5F2 797 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 NAV2Q8IVL1 2488 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 AHCTF1Q8WYP5 2266 aa16.61■□□□□ 0.25
NEK9-211ENST00000557673 TRAFD1O14545 582 aaPredicted RBP16.6■□□□□ 0.25
NEK9-211ENST00000557673 PNLIPP16233 465 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 CXCR5P32302 372 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 LIG3P49916 1009 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 MAXP61244 160 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 RALGDSQ12967 914 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 AGERQ15109 404 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 B4GALNT4Q76KP1 1039 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 CCNJLQ8IV13 435 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 EXD3Q8N9H8 876 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 TTC13Q8NBP0 860 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 WDR92Q96MX6 357 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 NUDCD1Q96RS6 583 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 WDR24Q96S15 920 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 RBM15Q96T37 977 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEK9-211ENST00000557673 CMKLR1Q99788 373 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 FAM118BQ9BPY3 351 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 POLR1EQ9GZS1 481 aaKnown RBP16.6■□□□□ 0.25
NEK9-211ENST00000557673 PISDQ9UG56 409 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 IL17BQ9UHF5 180 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 RABGEF1Q9UJ41 708 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 LOXL2Q9Y4K0 774 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 DGKBQ9Y6T7 804 aa16.6■□□□□ 0.25
NEK9-211ENST00000557673 A0A1W2PQM1 296 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 CASC3O15234 703 aaKnown RBP16.59■□□□□ 0.25
NEK9-211ENST00000557673 MTSS1O43312 755 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 NOBOXO60393 691 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 GLB1P16278 677 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 KELP23276 732 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 EIF3EP60228 445 aaKnown RBP16.59■□□□□ 0.25
NEK9-211ENST00000557673 GNG11P61952 73 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 MTM1Q13496 603 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 RALGPS1Q5JS13 557 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 MANEAQ5SRI9 462 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 CDKL3Q8IVW4 592 aaPredicted RBP16.59■□□□□ 0.25
NEK9-211ENST00000557673 GPR156Q8NFN8 814 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 CEP41Q9BYV8 373 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 HAUS2Q9NVX0 235 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEK9-211ENST00000557673 AKAP7Q9P0M2 348 aaPredicted RBP16.59■□□□□ 0.25
NEK9-211ENST00000557673 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 PCDHGC4Q9Y5F7 938 aa16.59■□□□□ 0.25
NEK9-211ENST00000557673 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms