RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GLYATL1P3A0A0U1RQE8 302 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 A0A1W2PR77 199 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PATE3B3GLJ2 98 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A9O60656 530 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PRAMEF1O95521 474 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PRSS56P0CW18 603 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A6P19224 532 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A1P22309 533 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A4P22310 534 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A3P35503 534 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A5P35504 534 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ATP13A5Q4VNC0 1218 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 TPRG1LQ5T0D9 272 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PTAR1Q7Z6K3 402 aaPredicted RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 ABI3BPQ7Z7G0 1075 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 CCDC25Q86WR0 208 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 IFT20Q8IY31 132 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 HDAC10Q969S8 669 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 FAM96AQ9H5X1 160 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A7Q9HAW7 530 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A10Q9HAW8 530 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 UGT1A8Q9HAW9 530 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 FSCN3Q9NQT6 498 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 NFU1Q9UMS0 254 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 HS3ST3A1Q9Y663 406 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 TEX264Q9Y6I9 313 aa15.2■□□□□ 0.02
NEDD1-213ENST00000557644 TNRC6BQ9UPQ9 1833 aaKnown RBP15.2■□□□□ 0.02
NEDD1-213ENST00000557644 E7ESA3 106 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 INPP4BO15327 924 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 PSMA3P25788 255 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CD38P28907 300 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 HADHAP40939 763 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 PFN3P60673 137 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 LAMB3Q13751 1172 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 Q6ZSR6 202 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 NLRP9Q7RTR0 991 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 HEATR4Q86WZ0 1026 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ZBED8Q8IZ13 594 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 EBNA1BP2Q99848 306 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 PLAC1Q9HBJ0 212 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ARFGAP3Q9NP61 516 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 SAYSD1Q9NPB0 183 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 KCTD5Q9NXV2 234 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 NFKBIL1Q9UBC1 381 aaPredicted RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TMPRSS11EQ9UL52 423 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CNOT6Q9ULM6 557 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 RPS6KL1Q9Y6S9 549 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 FAM237BA0A1B0GVD1 139 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CCDC162PA2VCL2 907 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 SRP72O76094 671 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 EPN2O95208 641 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TSHRP16473 764 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ARNTP27540 789 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 MC4RP32245 332 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TRIM23P36406 574 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CDKN1CP49918 316 aaPredicted RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 AFF3P51826 1226 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ACVR1Q04771 509 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ERCC6LQ2NKX8 1250 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 PEAR1Q5VY43 1037 aaPredicted RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CENPUQ71F23 418 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TMEM135Q86UB9 458 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 GSPT2Q8IYD1 628 aaKnown RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 SLC22A18ASQ8N1D0 253 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 FBXO36Q8NEA4 188 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CDH19Q9H159 772 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 CAAP1Q9H8G2 361 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 RAD18Q9NS91 495 aa15.19■□□□□ 0.02
NEDD1-213ENST00000557644 MAGEB16A2A368 324 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 A6NNZ2 444 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 GOLGA8KD6RF30 607 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 GOLGA8TH3BQL2 631 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 THEGLP0DJG4 465 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 MPLP40238 635 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 CUL1Q13616 776 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 NAA30Q147X3 362 aaPredicted RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 LAIR1Q6GTX8 287 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 KYAT3Q6YP21 454 aaKnown RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 NLRP8Q86W28 1048 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 UNC5BQ8IZJ1 945 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 OR6P1Q8NGX9 317 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 CFAP36Q96G28 342 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 LOXL4Q96JB6 756 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZSCAN5AQ9BUG6 496 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 APOOQ9BUR5 198 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 WDR26Q9H7D7 661 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 RIMKLBQ9ULI2 386 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZFHX2Q9C0A1 2572 aaPredicted RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 A0A1B0GTW7 788 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZCWPW2A0A1B0GU75 182 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 H7C0S8 307 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 VAPBO95292 243 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms