RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CASP9P55211 416 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 CDH8P55286 799 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 P2RX3P56373 397 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ACTR1AP61163 376 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 TRA2BP62995 288 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 CEBPZQ03701 1054 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 EGR4Q05215 589 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 AIMP2Q13155 320 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ATP1A4Q13733 1029 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 PTK6Q13882 451 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ARHGEF7Q14155 803 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 TRADDQ15628 312 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 CRY2Q49AN0 593 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 BOLA3Q53S33 107 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ZNF766Q5HY98 468 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 DGAT2L7PQ6IED9 249 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 SLC39A5Q6ZMH5 540 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 MRPL43Q8N983 215 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 OR6C4Q8NGE1 309 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 SETD6Q8TBK2 473 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 BPIFB1Q8TDL5 484 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 FAM216AQ8WUB2 273 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 HMGB4Q8WW32 186 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 CTNNBL1Q8WYA6 563 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 MRPL38Q96DV4 380 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 EDC3Q96F86 508 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 LINC00615Q96LM1 132 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 NEK1Q96PY6 1258 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 FIZ1Q96SL8 496 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 C6orf106Q9H6K1 298 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ZBTB26Q9HCK0 441 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 TM9SF3Q9HD45 589 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 IL1RAPL2Q9NP60 686 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 SPATS2LQ9NUQ6 558 aaKnown RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ZSCAN32Q9NX65 697 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 AATFQ9NY61 560 aaKnown RBP eCLIP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 KCND2Q9NZV8 630 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 CNIH4Q9P003 139 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 RAI14Q9P0K7 980 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 STK26Q9P289 416 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 MGAT4CQ9UBM8 478 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 TUBE1Q9UJT0 475 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 JRKLQ9Y4A0 524 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 PCDHAC2Q9Y5I4 1007 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 NFS1Q9Y697 457 aa3.39□□□□□ -1.87
FOXN3-217ENST00000557572 ZNF335Q9H4Z2 1342 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-217ENST00000557572 SCN5AQ14524 2016 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 PNMA6EA0A0J9YXQ4 647 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 RNF103-CHMP3A0A140T963 221 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 SH2D7A6NKC9 451 aaPredicted RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 EFCAB8A8MWE9 144 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 KPNA7A9QM74 516 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 RNF103O00237 685 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 WDR46O15213 610 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 INPPL1O15357 1258 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 GUCY1B2O75343 617 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 TADA2AO75478 443 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 RECQL5O94762 991 aaPredicted RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 HEXIM1O94992 359 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 LARGE1O95461 756 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 PTBP3O95758 552 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 DDAH2O95865 285 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 GHRP10912 638 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 HOXB2P14652 356 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 TPH1P17752 444 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 GABRB1P18505 474 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 SAT1P21673 171 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 PRKCHP24723 683 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 SLC5A2P31639 672 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 STIP1P31948 543 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 ASMTP46597 345 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 NOVP48745 357 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 CDK7P50613 346 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 MRPL12P52815 198 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 DSCR9P59020 149 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 UFM1P61960 85 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 YPEL5P62699 121 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 SF3A3Q12874 501 aaKnown RBP eCLIP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 RALGDSQ12967 914 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 NPRL3Q12980 569 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 CUL2Q13617 745 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 ALCAMQ13740 583 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 SNTB1Q13884 538 aaKnown RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 CRYMQ14894 314 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 FAM76BQ5HYJ3 339 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 STXBP5Q5T5C0 1151 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 CYP4A22Q5TCH4 519 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 C12orf60Q5U649 245 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 MANEALQ5VSG8 457 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 CES4AQ5XG92 561 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 ABLIM2Q6H8Q1 611 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 KIAA0930Q6ICG6 404 aaPredicted RBP3.38□□□□□ -1.87
FOXN3-217ENST00000557572 GBP6Q6ZN66 633 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 FAM57BQ71RH2 274 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 RUFY3Q7L099 469 aa3.38□□□□□ -1.87
FOXN3-217ENST00000557572 KBTBD6Q86V97 674 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms