RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 SCAMP4Q969E2 229 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 OXNAD1Q96HP4 312 aaPredicted RBP15.81■□□□□ 0.12
TUBB3-214ENST00000557490 SPATA13Q96N96 652 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 PPP1R2P1Q96PQ5 205 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 RIOK2Q9BVS4 552 aaKnown RBP15.81■□□□□ 0.12
TUBB3-214ENST00000557490 LGR4Q9BXB1 951 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 FSD1LQ9BXM9 530 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 CARD9Q9H257 536 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 FAM83DQ9H4H8 585 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 USP29Q9HBJ7 922 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 RAD18Q9NS91 495 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 SHOC2Q9UQ13 582 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 ZNF711Q9Y462 761 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 PCDHGA1Q9Y5H4 931 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 DGKBQ9Y6T7 804 aa15.81■□□□□ 0.12
TUBB3-214ENST00000557490 LRRK1Q38SD2 2015 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 TCRBV7S2A1N4TA0A589 114 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 LMO7DNF2Z398 122 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 GCATO75600 419 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 RFPL3O75679 317 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 C1QL1O75973 258 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 SLC4A1P02730 911 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 GIMD1P0DJR0 217 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 CDK4P11802 303 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 HLA-DPA1P20036 260 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 ACADVLP49748 655 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 DUSP3P51452 185 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 DEFB133Q30KQ1 61 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 SIRPB2Q5JXA9 342 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 ZCCHC8Q6NZY4 707 aaKnown RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 SLC13A5Q86YT5 568 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 FAM181AQ8N9Y4 354 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 SLC35B2Q8TB61 432 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 CCDC110Q8TBZ0 833 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 SCG3Q8WXD2 468 aaKnown RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 LRRC45Q96CN5 670 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 PDXPQ96GD0 296 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 MRGPRX2Q96LB1 330 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 APOLD1Q96LR9 279 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 FGF22Q9HCT0 170 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 NCKIPSDQ9NZQ3 722 aa15.8■□□□□ 0.12
TUBB3-214ENST00000557490 R3HDM2Q9Y2K5 976 aaKnown RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 AAR2Q9Y312 384 aaKnown RBP15.8■□□□□ 0.12
TUBB3-214ENST00000557490 C5orf60A6NFR6 353 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 ZSCAN12O43309 604 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 DKK1O94907 266 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 PLA2G2AP14555 144 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 PSMB4P28070 264 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 ILKQ13418 452 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 SLC1A5Q15758 541 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 ARHGEF18Q6ZSZ5 1173 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 TMC3Q7Z5M5 1100 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 GKN2Q86XP6 184 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 SDR16C5Q8N3Y7 309 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 FAM71DQ8N9W8 422 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 MDM1Q8TC05 714 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 GLMNQ92990 594 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 HIC2Q96JB3 615 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 FICDQ9BVA6 458 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 CLPBQ9H078 707 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 CDH19Q9H159 772 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 TRABDQ9H4I3 376 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 MRPL40Q9NQ50 206 aaKnown RBP15.79■□□□□ 0.12
TUBB3-214ENST00000557490 HACD3Q9P035 362 aa15.79■□□□□ 0.12
TUBB3-214ENST00000557490 COL5A1P20908 1838 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-214ENST00000557490 PRSS38A1L453 326 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 YY2O15391 372 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 SOD1P00441 154 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 FGF1P05230 155 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 CELA2BP08218 269 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-214ENST00000557490 CKMT1AP12532 417 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 ACP1P24666 158 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 CHRNA4P43681 627 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 RPIAP49247 311 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 TCEA2Q15560 299 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 DOK6Q6PKX4 331 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 LVRNQ6Q4G3 990 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 AGAP2Q99490 1192 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 TMEM121Q9BTD3 319 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 FRMD8Q9BZ67 464 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-214ENST00000557490 CARS2Q9HA77 564 aaKnown RBP15.78■□□□□ 0.12
TUBB3-214ENST00000557490 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
TUBB3-214ENST00000557490 INPP4BO15327 924 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 AGTP01019 485 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 CEACAM5P06731 702 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 GNPDA1P46926 289 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 DCDC1P59894 354 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 NR0B2Q15466 257 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 PARP6Q2NL67 630 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 C6orf132Q5T0Z8 1188 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 HENMT1Q5T8I9 393 aaKnown RBP15.77■□□□□ 0.12
TUBB3-214ENST00000557490 ALS2CLQ60I27 953 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 KCTD16Q68DU8 428 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 DHRS13Q6UX07 377 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 TAF8Q7Z7C8 310 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 BLOC1S5Q8TDH9 187 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 MAIP1Q8WWC4 291 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms