RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 VCX3BQ9H321 246 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MTG2Q9H4K7 406 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ZSCAN16Q9H4T2 348 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 RABEP2Q9H5N1 569 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 IPPKQ9H8X2 491 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 SLC6A20Q9NP91 592 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 AGPAT3Q9NRZ7 376 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 FAM49BQ9NUQ9 324 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 SPTLC3Q9NUV7 552 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ARGLU1Q9NWB6 273 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ARHGAP20Q9P2F6 1191 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 PCSK1NQ9UHG2 260 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 ACAD8Q9UKU7 415 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 SATB2Q9UPW6 733 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 HBS1LQ9Y450 684 aaKnown RBP4.98□□□□□ -1.61
ATXN3-247ENST00000557311 CFAP46Q8IYW2 2715 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 MYO16Q9Y6X6 1858 aa4.98□□□□□ -1.61
ATXN3-247ENST00000557311 TSC2P49815 1807 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 DENND4CQ5VZ89 1909 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ZNF638Q14966 1978 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 EDDM13A0A1B0GTR0 161 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ENO4A6NNW6 628 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SCAMP1O15126 338 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CLIC2O15247 247 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 FFAR2O15552 330 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SLC7A4O43246 635 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 AHCYL1O43865 530 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ATP6V1G1O75348 118 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 TNFSF15O95150 251 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SRPRAP08240 638 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 THEGLP0DJG4 465 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 DESP17661 470 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 RRM1P23921 792 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CCNCP24863 283 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CD70P32970 193 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 PIK3CAP42336 1068 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CYP2J2P51589 502 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CLNS1AP54105 237 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ADPRHP54922 357 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SLURP1P55000 103 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 HDAC4P56524 1084 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 YWHAGP61981 247 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 NFKB2Q00653 900 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 TLE1Q04724 770 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SETMARQ53H47 684 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 C3orf38Q5JPI3 329 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CFAP58Q5T655 872 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 PM20D1Q6GTS8 502 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 LIPIQ6XZB0 460 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SCARA5Q6ZMJ2 495 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 NEK10Q6ZWH5 1172 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 MAMDC2Q7Z304 686 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CLEC14AQ86T13 490 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CEP57L1Q8IYX8 460 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 AADATQ8N5Z0 425 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 KYQ8NBH2 561 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 WDR36Q8NI36 951 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 FIBINQ8TAL6 211 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 PHOSPHO1Q8TCT1 267 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 PARD3BQ8TEW8 1205 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CTNNBL1Q8WYA6 563 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 EXTL1Q92935 676 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 AZIN2Q96A70 460 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ATXN7L3BQ96GX2 97 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 LMLNQ96KR4 655 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 OSBPL10Q9BXB5 764 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CAPS2Q9BXY5 557 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SLC7A5P2Q9GIP4 190 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 TSPY26PQ9H489 355 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CYP3A43Q9HB55 503 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ZNF304Q9HCX3 659 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 BATF3Q9NR55 127 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 OLA1Q9NTK5 396 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 UCKL1Q9NWZ5 548 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 NLGN3Q9NZ94 848 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 DTLQ9NZJ0 730 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 NCKIPSDQ9NZQ3 722 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 IP6K2Q9UHH9 426 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 CYTH4Q9UIA0 394 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ERVW-1Q9UQF0 538 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 PCDHA9Q9Y5H5 950 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
ATXN3-247ENST00000557311 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
ATXN3-247ENST00000557311 ANAPC1Q9H1A4 1944 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 COL5A1P20908 1838 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 A0A1W2PNU3 283 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CPED1A4D0V7 1026 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 EME2A4GXA9 379 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 CLEC18AA5D8T8 446 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 TTC34A8MYJ7 566 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 K7ESM1 405 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 EIF3FO00303 357 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-247ENST00000557311 IRAK2O43187 625 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 ATP8B1O43520 1251 aa4.96□□□□□ -1.62
ATXN3-247ENST00000557311 PLRG1O43660 514 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms