RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 C9orf172C9J069 976 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 HGSO14964 777 aaPredicted RBP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 MAP3K6O95382 1288 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 CLDN7O95471 211 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 GYPCP04921 128 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 KRT7P08729 469 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 H2AFZP0C0S5 128 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 MX2P20592 715 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 CA4P22748 312 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 CASP14P31944 242 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 GJC1P36383 396 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 STC1P52823 247 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 RPL26P61254 145 aaKnown RBP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 TRA2AQ13595 282 aaKnown RBP eCLIP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 MANEAQ5SRI9 462 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 XKR5Q6UX68 686 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 H2AFVQ71UI9 128 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 DTX1Q86Y01 620 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 SGF29Q96ES7 293 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 COX14Q96I36 57 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 AGAP2Q99490 1192 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 NUDT22Q9BRQ3 303 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 RIOK2Q9BVS4 552 aaKnown RBP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 TDRD1Q9BXT4 1180 aaKnown RBP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 FOXJ2Q9P0K8 574 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 IFNKQ9P0W0 207 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 UVRAGQ9P2Y5 699 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 LCMT1Q9UIC8 334 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 NENFQ9UMX5 172 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 RPL26L1Q9UNX3 145 aaKnown RBP15.8■□□□□ 0.12
TUBB3-213ENST00000557262 TTLL3Q9Y4R7 772 aa15.8■□□□□ 0.12
TUBB3-213ENST00000557262 SCN8AQ9UQD0 1980 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 ASMTLO95671 621 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 CCL4P13236 92 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 HNRNPH3P31942 346 aaKnown RBP15.79■□□□□ 0.12
TUBB3-213ENST00000557262 LIMK2P53671 638 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 TAS2R40P59535 323 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 NIPAL4Q0D2K0 466 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 SLC10A2Q12908 348 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-213ENST00000557262 LRP8Q14114 963 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 NKAIN2Q5VXU1 208 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
TUBB3-213ENST00000557262 TRIM74Q86UV6 250 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 CPNE8Q86YQ8 564 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 GALNT13Q8IUC8 556 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 PQLC3Q8N755 202 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 CCNYQ8ND76 341 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 RCBTB1Q8NDN9 531 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 OR4D9Q8NGE8 314 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 CTNNBL1Q8WYA6 563 aaPredicted RBP15.79■□□□□ 0.12
TUBB3-213ENST00000557262 FAF2Q96CS3 445 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 TAAR9Q96RI9 348 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 LYSMD1Q96S90 227 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 DPYSL5Q9BPU6 564 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 PCDH9Q9HC56 1237 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 KCNK4Q9NYG8 393 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
TUBB3-213ENST00000557262 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.12
TUBB3-213ENST00000557262 TRBV23OR9-2A0A075B6M9 112 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 IGHV1OR21-1A0A087WYE8 117 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 ANKRD66B4E2M5 251 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 J3QKU1 62 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 INPP4BO15327 924 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 HLA-DQB2P05538 268 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 KDELR1P24390 212 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 GBE1Q04446 702 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 SRSF6Q13247 344 aaKnown RBP15.78■□□□□ 0.12
TUBB3-213ENST00000557262 ZFYVE27Q5T4F4 411 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 CCDC13Q8IYE1 715 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 ZSCAN1Q8NBB4 408 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 LPCAT1Q8NF37 534 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 LRRN4Q8WUT4 740 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 CCDC74BQ96LY2 380 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 RNF157Q96PX1 679 aa15.78■□□□□ 0.12
TUBB3-213ENST00000557262 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-213ENST00000557262 DNAJC6O75061 913 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 JCHAINP01591 159 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 ITGB2P05107 769 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 FGF3P11487 239 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-213ENST00000557262 FASLGP48023 281 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 SPINT3P49223 89 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 GPLD1P80108 840 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 SLC18A3Q16572 532 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 LINC00303Q3SY05 128 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 TMEM71Q6P5X7 295 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 EXD3Q8N9H8 876 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 AGBL5Q8NDL9 886 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 CCHCR1Q8TD31 782 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 WDR24Q96S15 920 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 MLPHQ9BV36 600 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-213ENST00000557262 PACSIN1Q9BY11 444 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 FAM83DQ9H4H8 585 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 DTLQ9NZJ0 730 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 PKD2L2Q9NZM6 624 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 VPS18Q9P253 973 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 CNOT6Q9ULM6 557 aaKnown RBP15.77■□□□□ 0.12
TUBB3-213ENST00000557262 PCDHGA3Q9Y5H0 932 aa15.77■□□□□ 0.12
TUBB3-213ENST00000557262 PIEZO2Q9H5I5 2752 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 C1orf232A0A0U1RR37 186 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms